Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03942 ATGGGCATGGATTACTACAACATTTTGAAAGTGAACCGAAACGCGAGTGACGAGGACCTGAAGAAAGCGTACAAGAGACTCGCAATGATCTGGCACCCCGACAAGAACCCCCTCAACAAGTCCGAAGCTGAGGCCAAATTCAAACGTATCTCCGAAGCATACGATGTTCTCAGCGACCCTCAGAAGCGTCAGATCTACGATCTCTACGGCGAGGAGGCTCTCAAGTCCGGTCAGTTCCCCCCGCCTCCGCCGTCGTCGTCGTCGTCATCATCTTCCTACTATTCTTCTTCCTCTTCTTCGCGCCCTTATCAGAACGGCAGCGCACACCACCACCAGCGCCAGAACCCTGGCACGTCGTCGTCATCCTTTCGGTTTAATCCCCGCGATGCTGACGACATTTACGCCGAGATCTTCGGCAGCGAAGGGGGTGACGTGGGCAGCAGTGGGGCGAGGGGAGGTGGTGGCGCGCGGAGGGATGCGTTCTTTAAGACGTCGAATGGGTTCGCCGGGGCGGCGAGGAAGGCTGCTGCTGTCGAGAACGTGCTGCCGTGTAGCTTGGAGGAACTATACAAGGGAATCAAGAAGAAGATGAAGATCTCCAGAACAGTCTGTGATACTTTTGGAAAGCTCCGGAATGTGGAGGAGATTTTGACAATCGAGATAAAACCTGGATGGAAGAAAGGAACAAAGGTTACTTTCCCGGAGAAGGGTAACCAGGAGCCAGGTGTCATCCCAGCCGATCTTGTTTTTGTGATAGATGAGAAACCACACATTCTATATAGAAGGGATGGTAATGACTTGGTGATACACCAGGAGATATCACTTTTGGAGGCTCTTACAGGTAAAACTTTGGACTTGACAACTTTGGATGGAAGGAGTCTAATGATCCCACTCACAGATATTATTAAACCTGGTGCTGAGGTTGTTGTCCCTAATGAAGGAATGCCCATATCGAAAGAACCTGGGAAAAAGGGGAATTTGAGAATTAAGCTTGATGTCAAGTATCCTTCAAGGCTAACTCCAGAGCAGAAATCTGATCTCAGGAGAGTATTGGGTGGAGTCTCATAG 1068 0.5037 MGMDYYNILKVNRNASDEDLKKAYKRLAMIWHPDKNPLNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPPSSSSSSSSYYSSSSSSRPYQNGSAHHHQRQNPGTSSSSFRFNPRDADDIYAEIFGSEGGDVGSSGARGGGGARRDAFFKTSNGFAGAARKAAAVENVLPCSLEELYKGIKKKMKISRTVCDTFGKLRNVEEILTIEIKPGWKKGTKVTFPEKGNQEPGVIPADLVFVIDEKPHILYRRDGNDLVIHQEISLLEALTGKTLDLTTLDGRSLMIPLTDIIKPGAEVVVPNEGMPISKEPGKKGNLRIKLDVKYPSRLTPEQKSDLRRVLGGVS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03942 355 CDD DnaJ 4 59 IPR001623 -
Arst5g03942 355 MobiDBLite consensus disorder prediction 88 125 - -
Arst5g03942 355 Gene3D - 176 255 - -
Arst5g03942 355 CDD DnaJ_C 182 339 - -
Arst5g03942 355 PRINTS DnaJ domain signature 6 24 IPR001623 -
Arst5g03942 355 PRINTS DnaJ domain signature 62 81 IPR001623 -
Arst5g03942 355 PRINTS DnaJ domain signature 24 39 IPR001623 -
Arst5g03942 355 PRINTS DnaJ domain signature 42 62 IPR001623 -
Arst5g03942 355 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Arst5g03942 355 FunFam DNAJ heat shock family protein 256 351 - -
Arst5g03942 355 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Arst5g03942 355 MobiDBLite consensus disorder prediction 74 125 - -
Arst5g03942 355 SUPERFAMILY HSP40/DnaJ peptide-binding domain 260 345 IPR008971 GO:0006457|GO:0051082
Arst5g03942 355 SMART dnaj_3 3 62 IPR001623 -
Arst5g03942 355 SUPERFAMILY HSP40/DnaJ peptide-binding domain 181 257 IPR008971 GO:0006457|GO:0051082
Arst5g03942 355 Pfam DnaJ C terminal domain 181 336 IPR002939 -
Arst5g03942 355 FunFam Dnaj homolog subfamily b member 174 255 - -
Arst5g03942 355 SUPERFAMILY Chaperone J-domain 3 83 IPR036869 -
Arst5g03942 355 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 351 - -
Arst5g03942 355 Gene3D DnaJ domain 1 80 IPR036869 -
Arst5g03942 355 Gene3D - 257 337 - -
Arst5g03942 355 Pfam DnaJ domain 4 67 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03942 Arst-Chr5 100514697 100520503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03942 5 74 C2H2 Transcription Factor Family AT1G74250 36.486 3.08e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03942 K09510 - gmx:100781572 529.25