Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst5g03940 | ATGGGAAACTGCAACGCTTGCGCCAGAGCAGATGTAGTAGACAGCACAACAACCACAACCACAAAGCCTAACACCAACAACCGTAAACCGAACCCCTTTTCTTCCACTCCGGCCCGGCCAGCCAACCCGATCCGCGTCCTGAACAACGACATCCCCGCGGGCCCGCAGCACCGGGCCCGAATCAGCGACGATTACATACTTGGCCGTGAGCTGGGCCGCGGCGAATTCGGCATAACCTACCTCTGCACTGACCGCGAGACCAAAGAAGCTCTGGCGTGTAAGTCCATCTCGAAGCGGAAGCTCCGCACTGCCGTCGACGTAGACGACGTGCGGCGCGAGGTGAAGATCATGTCCACGCTGCCGCCGCATCCGAACGTGGTGCAGCTGAAGGGAGCTTATGAGGACGACGAGAACGTTCACATAGTTATGGAGCTCTGTGAGGGCGGCGAGCTCTTCGATAGGATCGTTGCCAGGGGACACTACAGCGAGCGCGCCGCCGCCGGAGTGTTCCGAACGATCGCGGAGGTTGTTAGGATGTGCCACGCTAACGGTGTCATGCATAGAGACCTCAAGCCCGAGAATTTCTTGTTTGCTAACAAGAAGGAGAATTCGCCCCTCAAGGCCATTGATTTTGGCTTGTCTGTGTTCTTCAAGCCAGGGGAGAGGTTTTCGGAGATTGTGGGGAGTCCTTACTACATGGCGCCGGAGGTATTGAAGAGGAATTATGGACCGGAGATAGATGTGTATGGCTTTTGTGTTCTTGTTTTGGTTTGTGGAGAGACGGAGCAAGGTGTGGCTCTGGCAATATTGAGGGGGGTGATTGATTTCAAGAGGGAACCTTGGCCGCATATATCAGATAGCGCTAAAAGCCTTGTCCGGCAGATGTTGGAACCAGATCCTAAAAAGCGCTTGACTGCTGAACAGGTGCTTGCACATCCATGGCTACAAAATGCCAAGAAAGCTCCAAATGTTCCATTAGGTGATCTTGTGAGGTCAAGGCTTAAGCAGTTTTCTATGATGAATAGATTCAAAAAGAAAGCTCTTCGGGTAATTGCAGATCATTTATCTGTTGAAGAGGTAGAAATAATCAAAGATATGTTTACATTGATGGACACCGACAAAGACGGAAGAGTAACATACGAAGAACTAAAGGCTGGGTTGAGGAAAGTTGGTTCACAATTGGCTGAGCCAGAGATAAAGTTGCTGATGGAAGTGGCCGATGTCGATGGGAATGGAATACTTGACTATGGGGAGTTTGTAGCTGTTACCATTCACTTGCAAAAAATGGAGAACGATGAGCATTTCCGCAAAGCATTCAAGTATTTTGACAAAGACAGTAGTGGTTATATTGAGTTTGGTGAACTACAGGAAGCATTAGCAGATGAGTCAGGAGAAACTGATCATGATGTTTTGAATGACATCATGCGTGAAGTTGACACTGATAAGGATGGTCGCATCAGTTATGAGGAGTTTGTTGCCATGATGAAAACTGGAACTGACTGGAGAAAAGCATCTAGGCAATATTCAAGGGAGAGATTCAAGAGTTTGAGCCTAAACTTGATGAAAGACGGCTCTCTTCAGCTTCATGACGGTATCAGTGGTCAAGCTGTAGTGGTTTAA | 1620 | 0.4901 | MGNCNACARADVVDSTTTTTTKPNTNNRKPNPFSSTPARPANPIRVLNNDIPAGPQHRARISDDYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDVDDVRREVKIMSTLPPHPNVVQLKGAYEDDENVHIVMELCEGGELFDRIVARGHYSERAAAGVFRTIAEVVRMCHANGVMHRDLKPENFLFANKKENSPLKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDVYGFCVLVLVCGXETEQGVALAILRGVIDFKREPWPHISDSAKSLVRQMLEPDPKKRLTAEQVLAHPWLQNAKKAPNVPLGDLVRSRLKQFSMMNRFKKKALRVIADHLSVEEVEIIKDMFTLMDTDKDGRVTYEELKAGLRKVGSQLAEPEIKLLMEVADVDGNGILDYGEFVAVTIHLQKMENDEHFRKAFKYFDKDSSGYIEFGELQEALADESGETDHDVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGISGQAVVV | 540 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst5g03940 | 540 | CDD | STKc_CAMK | 64 | 315 | - | - | |
Arst5g03940 | 540 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 185 | 197 | IPR008271 | GO:0004672|GO:0006468 | |
Arst5g03940 | 540 | FunFam | calcium-dependent protein kinase 13 | 151 | 324 | - | - | |
Arst5g03940 | 540 | CDD | EFh | 435 | 497 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | Gene3D | Phosphorylase Kinase; domain 1 | 66 | 150 | - | - | |
Arst5g03940 | 540 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 324 | - | - | |
Arst5g03940 | 540 | ProSitePatterns | EF-hand calcium-binding domain. | 444 | 456 | IPR018247 | - | |
Arst5g03940 | 540 | ProSitePatterns | Protein kinases ATP-binding region signature. | 71 | 94 | IPR017441 | GO:0005524 | |
Arst5g03940 | 540 | ProSitePatterns | EF-hand calcium-binding domain. | 480 | 492 | IPR018247 | - | |
Arst5g03940 | 540 | ProSiteProfiles | Protein kinase domain profile. | 65 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Arst5g03940 | 540 | Pfam | EF-hand domain pair | 434 | 497 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | Pfam | EF-hand domain pair | 364 | 423 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | Gene3D | - | 325 | 500 | - | - | |
Arst5g03940 | 540 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 467 | 502 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | SMART | efh_1 | 471 | 499 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | SMART | efh_1 | 363 | 391 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | SMART | efh_1 | 435 | 463 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | SMART | efh_1 | 399 | 427 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | ProSitePatterns | EF-hand calcium-binding domain. | 408 | 420 | IPR018247 | - | |
Arst5g03940 | 540 | SMART | serkin_6 | 65 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Arst5g03940 | 540 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 431 | 466 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | SUPERFAMILY | Protein kinase-like (PK-like) | 57 | 341 | IPR011009 | - | |
Arst5g03940 | 540 | MobiDBLite | consensus disorder prediction | 15 | 55 | - | - | |
Arst5g03940 | 540 | MobiDBLite | consensus disorder prediction | 15 | 35 | - | - | |
Arst5g03940 | 540 | FunFam | Calcium-dependent protein kinase 7 | 325 | 500 | - | - | |
Arst5g03940 | 540 | SUPERFAMILY | EF-hand | 344 | 523 | IPR011992 | - | |
Arst5g03940 | 540 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 58 | 492 | - | - | |
Arst5g03940 | 540 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 395 | 430 | IPR002048 | GO:0005509 | |
Arst5g03940 | 540 | Pfam | Protein kinase domain | 67 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Arst5g03940 | 540 | FunFam | Calcium-dependent protein kinase 1 | 67 | 150 | - | - | |
Arst5g03940 | 540 | ProSitePatterns | EF-hand calcium-binding domain. | 372 | 384 | IPR018247 | - | |
Arst5g03940 | 540 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 359 | 394 | IPR002048 | GO:0005509 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst5g03940 | Arst-Chr5 | 100485930 | 100490496 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst5g03940 | 1 | 540 | EF-hand Containing Proteins | AT1G18890 | 77.148 | 0.0 | 861 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Arst5g03940 | Pkinase | 5.6e-64 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst5g03940 | K13412 | - | gmx:100809838 | 925.235 |