Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03940 ATGGGAAACTGCAACGCTTGCGCCAGAGCAGATGTAGTAGACAGCACAACAACCACAACCACAAAGCCTAACACCAACAACCGTAAACCGAACCCCTTTTCTTCCACTCCGGCCCGGCCAGCCAACCCGATCCGCGTCCTGAACAACGACATCCCCGCGGGCCCGCAGCACCGGGCCCGAATCAGCGACGATTACATACTTGGCCGTGAGCTGGGCCGCGGCGAATTCGGCATAACCTACCTCTGCACTGACCGCGAGACCAAAGAAGCTCTGGCGTGTAAGTCCATCTCGAAGCGGAAGCTCCGCACTGCCGTCGACGTAGACGACGTGCGGCGCGAGGTGAAGATCATGTCCACGCTGCCGCCGCATCCGAACGTGGTGCAGCTGAAGGGAGCTTATGAGGACGACGAGAACGTTCACATAGTTATGGAGCTCTGTGAGGGCGGCGAGCTCTTCGATAGGATCGTTGCCAGGGGACACTACAGCGAGCGCGCCGCCGCCGGAGTGTTCCGAACGATCGCGGAGGTTGTTAGGATGTGCCACGCTAACGGTGTCATGCATAGAGACCTCAAGCCCGAGAATTTCTTGTTTGCTAACAAGAAGGAGAATTCGCCCCTCAAGGCCATTGATTTTGGCTTGTCTGTGTTCTTCAAGCCAGGGGAGAGGTTTTCGGAGATTGTGGGGAGTCCTTACTACATGGCGCCGGAGGTATTGAAGAGGAATTATGGACCGGAGATAGATGTGTATGGCTTTTGTGTTCTTGTTTTGGTTTGTGGAGAGACGGAGCAAGGTGTGGCTCTGGCAATATTGAGGGGGGTGATTGATTTCAAGAGGGAACCTTGGCCGCATATATCAGATAGCGCTAAAAGCCTTGTCCGGCAGATGTTGGAACCAGATCCTAAAAAGCGCTTGACTGCTGAACAGGTGCTTGCACATCCATGGCTACAAAATGCCAAGAAAGCTCCAAATGTTCCATTAGGTGATCTTGTGAGGTCAAGGCTTAAGCAGTTTTCTATGATGAATAGATTCAAAAAGAAAGCTCTTCGGGTAATTGCAGATCATTTATCTGTTGAAGAGGTAGAAATAATCAAAGATATGTTTACATTGATGGACACCGACAAAGACGGAAGAGTAACATACGAAGAACTAAAGGCTGGGTTGAGGAAAGTTGGTTCACAATTGGCTGAGCCAGAGATAAAGTTGCTGATGGAAGTGGCCGATGTCGATGGGAATGGAATACTTGACTATGGGGAGTTTGTAGCTGTTACCATTCACTTGCAAAAAATGGAGAACGATGAGCATTTCCGCAAAGCATTCAAGTATTTTGACAAAGACAGTAGTGGTTATATTGAGTTTGGTGAACTACAGGAAGCATTAGCAGATGAGTCAGGAGAAACTGATCATGATGTTTTGAATGACATCATGCGTGAAGTTGACACTGATAAGGATGGTCGCATCAGTTATGAGGAGTTTGTTGCCATGATGAAAACTGGAACTGACTGGAGAAAAGCATCTAGGCAATATTCAAGGGAGAGATTCAAGAGTTTGAGCCTAAACTTGATGAAAGACGGCTCTCTTCAGCTTCATGACGGTATCAGTGGTCAAGCTGTAGTGGTTTAA 1620 0.4901 MGNCNACARADVVDSTTTTTTKPNTNNRKPNPFSSTPARPANPIRVLNNDIPAGPQHRARISDDYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDVDDVRREVKIMSTLPPHPNVVQLKGAYEDDENVHIVMELCEGGELFDRIVARGHYSERAAAGVFRTIAEVVRMCHANGVMHRDLKPENFLFANKKENSPLKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDVYGFCVLVLVCGXETEQGVALAILRGVIDFKREPWPHISDSAKSLVRQMLEPDPKKRLTAEQVLAHPWLQNAKKAPNVPLGDLVRSRLKQFSMMNRFKKKALRVIADHLSVEEVEIIKDMFTLMDTDKDGRVTYEELKAGLRKVGSQLAEPEIKLLMEVADVDGNGILDYGEFVAVTIHLQKMENDEHFRKAFKYFDKDSSGYIEFGELQEALADESGETDHDVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGISGQAVVV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03940 540 CDD STKc_CAMK 64 315 - -
Arst5g03940 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Arst5g03940 540 FunFam calcium-dependent protein kinase 13 151 324 - -
Arst5g03940 540 CDD EFh 435 497 IPR002048 GO:0005509
Arst5g03940 540 Gene3D Phosphorylase Kinase; domain 1 66 150 - -
Arst5g03940 540 Gene3D Transferase(Phosphotransferase) domain 1 151 324 - -
Arst5g03940 540 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Arst5g03940 540 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Arst5g03940 540 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Arst5g03940 540 ProSiteProfiles Protein kinase domain profile. 65 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03940 540 Pfam EF-hand domain pair 434 497 IPR002048 GO:0005509
Arst5g03940 540 Pfam EF-hand domain pair 364 423 IPR002048 GO:0005509
Arst5g03940 540 Gene3D - 325 500 - -
Arst5g03940 540 ProSiteProfiles EF-hand calcium-binding domain profile. 467 502 IPR002048 GO:0005509
Arst5g03940 540 SMART efh_1 471 499 IPR002048 GO:0005509
Arst5g03940 540 SMART efh_1 363 391 IPR002048 GO:0005509
Arst5g03940 540 SMART efh_1 435 463 IPR002048 GO:0005509
Arst5g03940 540 SMART efh_1 399 427 IPR002048 GO:0005509
Arst5g03940 540 ProSitePatterns EF-hand calcium-binding domain. 408 420 IPR018247 -
Arst5g03940 540 SMART serkin_6 65 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03940 540 ProSiteProfiles EF-hand calcium-binding domain profile. 431 466 IPR002048 GO:0005509
Arst5g03940 540 SUPERFAMILY Protein kinase-like (PK-like) 57 341 IPR011009 -
Arst5g03940 540 MobiDBLite consensus disorder prediction 15 55 - -
Arst5g03940 540 MobiDBLite consensus disorder prediction 15 35 - -
Arst5g03940 540 FunFam Calcium-dependent protein kinase 7 325 500 - -
Arst5g03940 540 SUPERFAMILY EF-hand 344 523 IPR011992 -
Arst5g03940 540 PANTHER SERINE/THREONINE-PROTEIN KINASE 58 492 - -
Arst5g03940 540 ProSiteProfiles EF-hand calcium-binding domain profile. 395 430 IPR002048 GO:0005509
Arst5g03940 540 Pfam Protein kinase domain 67 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03940 540 FunFam Calcium-dependent protein kinase 1 67 150 - -
Arst5g03940 540 ProSitePatterns EF-hand calcium-binding domain. 372 384 IPR018247 -
Arst5g03940 540 ProSiteProfiles EF-hand calcium-binding domain profile. 359 394 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03940 Arst-Chr5 100485930 100490496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03940 1 540 EF-hand Containing Proteins AT1G18890 77.148 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst5g03940 Pkinase 5.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03940 K13412 - gmx:100809838 925.235