Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03902 ATGTCATCAGAGGTTGATGATGAGCTCATGGAAACACTCTTTGGTTATTCAACCACCAACAAAACTCAAGAAAGAAGCAAAAATGTCTCAACTTTGACAAAGTCTAACTCCAACACACCAACTCAAATATTCATTTTGGAGCCAAGAAAATCCCAAAACACTGCAATTGTTCTAAGATCACTTGCCACCTCTCGCAGGACTATCTTGGAAGCACTACTTGACGGCCAAGGACTAAGCCTAGAGACGCTCGAAAAGCTCACCAAAATAGCTCCCACACAAGAAGAAGAATCCAAGATCATGCAGTTCAATGGCAACCCTGAAAAGCTTGCAGACGCCGAGTCTTTCCTCTACCACATCCTCAAAGCGGTTCCAACCACATTCCATCGTCTCAAAGCCATGCTTTTCAGGTATACTTATGACTATGAAGTTCTTCAACTGAAAGAATATTTGCAAGCACTCGAAATGGGTTGCCGGGAACTGAGAACTAGTGCTTTGTTCCTGAAGCTTCTTGAGGCAATTCTCAAAGCTGGGAACAGAATGAATGCGGGAACATCAAGAGGGAATGCAAAAGCATTCAATTTGAGTGCTCTTAAAAAACTCTCTGATGTGAAAAGCACAGATGGAAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTGGTTCAATCAGAAGGTAAAAGAAAAGCTATGTACCAAAGAATCAATGGCGAAAAAGAACACATAATGCTTGGTTTTGCAGCCCTGGATGGGTTAAGAGATGAGGTATCTGAAGCAAAGAAAGCAGCGAGTATAGAGTATCAAACTTTTATCACAATGTATTCCAATCTCAATTCTCATGTTATTGAAATCAAGGAGATTGTAACAAAATGTTGTGGCAGCAGCAACACTAGCGTTGATGGGTGTGGTGGGTTTTTAAAGGAAATGAAAGGGTTCATAGAGGAATGCGAGGAAGAGCTTAAGGTTGTGAAAGAAGAGCAAACAAGGATCATGGATCTTGTGAGGAAAACTAATGGTTATTATCTACCAGGAACATTTTTATCTAAAGATAACGGCAATTTGACGAACCCCTTTGAATTGTTTGTGATTGTGAAAGATTTTGTTGATATGGTGGATCAGGCTTGTGTGGAGCTTAAAAAGAAGATGGAAAAGAAGGGTGTTGTAGGAACAGCAGAAGGTGGATTGGAACCACTACCTTTGTCTCCTTCAAAGAGGGTACCAACTAGATTTCCCAACTTTGATTTATATTTTTCGTCAAATGTGTTGGAATCTACTTCCTTCAGCCAATCAGAAGATGATTCCTGA 1302 0.404 MSSEVDDELMETLFGYSTTNKTQERSKNVSTLTKSNSNTPTQIFILEPRKSQNTAIVLRSLATSRRTILEALLDGQGLSLETLEKLTKIAPTQEEESKIMQFNGNPEKLADAESFLYHILKAVPTTFHRLKAMLFRYTYDYEVLQLKEYLQALEMGCRELRTSALFLKLLEAILKAGNRMNAGTSRGNAKAFNLSALKKLSDVKSTDGKTSLLHFIVEQVVQSEGKRKAMYQRINGEKEHIMLGFAALDGLRDEVSEAKKAASIEYQTFITMYSNLNSHVIEIKEIVTKCCGSSNTSVDGCGGFLKEMKGFIEECEEELKVVKEEQTRIMDLVRKTNGYYLPGTFLSKDNGNLTNPFELFVIVKDFVDMVDQACVELKKKMEKKGVVGTAEGGLEPLPLSPSKRVPTRFPNFDLYFSSNVLESTSFSQSEDDS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03902 433 SUPERFAMILY Formin homology 2 domain (FH2 domain) 41 384 - -
Arst5g03902 433 Coils Coil 305 332 - -
Arst5g03902 433 PANTHER FORMIN-RELATED 2 391 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Arst5g03902 433 Pfam Formin Homology 2 Domain 4 370 IPR015425 -
Arst5g03902 433 Gene3D Formin, FH2 domain 1 386 IPR042201 -
Arst5g03902 433 SMART it6_source 3 385 IPR015425 -
Arst5g03902 433 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 396 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03902 Arst-Chr5 100083840 100085295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03902 6 431 FH2 protein (formin) Gene Family AT1G70140 44.835 1.26e-116 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03902 - - gmx:100819989 587.415