Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03895 ATGGGAACTGCAGAAGAAAGAGCCATTGCTGTTATCATGGTTGGAGGCCCCACCAAAGGTACTAGATTCAGGCCATTGTCATTCGACATACCTAAGCCACTTTTTCCATTGGCGGGACAACCCATGGTCCATCACCCAATTTCTGCTTGTAAACGGATTCCTAATTTGGCTCAGATTTATCTAATTGGTTTCCATGAGGAGCGCGAATTTGCATTATTTGTTTCCTCCGTCTCAAACGAGCTTAAAGTCCCTATTAAATATCTGAAAGAAGACAAGCCTCATGGGTCAGCTGGTGGTCTTTATAGCTTTAGAGATCAAATCATGGAGGATGATCCGTCACATATTTTTTTGCTAAACTGTGATGTTTGCTGCAGCTTTCCACTACCGGAAATGCTCGATGCTCATAGAAAATATGGTGGGATGGGAACAATATTAGTTGTTAAGGTTTCGCCAGAGTCGGCCAGTGAATTTGGGGAATTGGTAGCTGATCCAGTAACCAATGAACTGTTGCATTACATTGAGAAACCTGAAACTTTTGTAAGTGATCTAATAAACTGTGGTGTGTATATATTTACACCAGATATATTTACTGCAATTGAGGGTGTTACTACTCAGCAGAAAAATAGAGCTAATCTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCCAGACACAAGGAATCTTTCTTCCGATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCAGGGAAGAAACAGTTATACATTTATGAAACCAAAGACTTCTGGGAACAAATCAAAACTCCTGGAATGTCCATAAAATGTTCTGCCTTGTATCTTTCCCAATTTCGTCCCATCTCGCCACAACTATTGGCAAATGGAGATGGTATTAAGAAAGCCAGCATCAGTGGTGATGTTTATATTCACCCATCTGCTAAAGTGCATCCAACAGCAAAGATTGGCCCTGGTGTATCAATATCTGCAAATGCTCGTATCGGAGCTGGTGCAAGGCTCATAAATTGTATCATCCTAGATGATGCAGAAATTAAGGAGAATGCTGTTGTCATTCATGCAATTGTCGGATGGAAATCTTCTATTGGACGCTGGGCCCGTATCCAGGCTAGCGGAGATTACAATGCAAAACTTGGGGTTACTTTGCTTGGAGAATCTGTGATAGTTGAGGATGAGGTTGTGGTTGTTAATAGCATTGTCCTTCCACACAAGACCTTAAATGTGAGAGTTCAAGATGAGATTCTTTTGTAA 1248 0.4135 MGTAEERAIAVIMVGGPTKGTRFRPLSFDIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFHEEREFALFVSSVSNELKVPIKYLKEDKPHGSAGGLYSFRDQIMEDDPSHIFLLNCDVCCSFPLPEMLDAHRKYGGMGTILVVKVSPESASEFGELVADPVTNELLHYIEKPETFVSDLINCGVYIFTPDIFTAIEGVTTQQKNRANLRRVSSFEAMQPDTRNLSSDYVRLDQDILSPLAGKKQLYIYETKDFWEQIKTPGMSIKCSALYLSQFRPISPQLLANGDGIKKASISGDVYIHPSAKVHPTAKIGPGVSISANARIGAGARLINCIILDDAEIKENAVVIHAIVGWKSSIGRWARIQASGDYNAKLGVTLLGESVIVEDEVVVVNSIVLPHKTLNVRVQDEILL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03895 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
Arst5g03895 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Arst5g03895 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Arst5g03895 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 277 IPR029044 -
Arst5g03895 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 10 414 - -
Arst5g03895 415 Pfam Nucleotidyl transferase 10 212 IPR005835 GO:0009058
Arst5g03895 415 Gene3D Hexapeptide repeat proteins 286 412 - -
Arst5g03895 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03895 Arst-Chr5 99975084 100006761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03895 20 350 Eukaryotic Initiation Factors Gene Family AT2G34970 24.219 3.25e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03895 K00966 - gmx:100780801 729.169