Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03886 ATGGCGATCTCAACACCAAGAAGAGAGCTCTTCATAGATGGAGAGTGGAAAGCCCCTCTCCTCAACAACCGAATTCCAATCTTACCATTGCAGCATATGGTAGGGGATATCCCAGCAGCTACTAAGGAAGATGTGGAACTTGCGGTGGATGCTGCAAGAAGAGCACTGTCTCGGAACAAGGGAAGAGATTGGTCAACAGCTTCTGGCTCTCTTCGTGCTATATATCTTAGAGCCATTGCTGCAAAGATAACGGAGAAAAAGGATGAGCTTGCAAAGCTTGAAGCTACTGATAATGGGAAACCGCTTGATGAAGCAGCAGCCGACATGGATGATGTTATTAGTTGTTTTAGCTACTATGCTGAACTTGCTGAAGGGTTGGATGCAAAGCAAAAGGCACATGTGTCTCTTCCTATGGAGAACTTCAAGAGTTATGTGATCAAGGAGCCAATTGGTGTTGTTGCGTTGATTACTCCATGGAACTATCCGTTGCTAATGGCAGCATGGAAAGTTGGTGCTGCTCTGGCTGCTGGTTGTACTGCAGTATTGAAGCCATCTGAACTGGCATCTGTGACATGTTTGGAGTTGGCTGAAATATGCAAAGAAGTAGGTCTTCCAGCAGGGGTGTTAAACGTGATCACTGGATTAGGCACTGAAGCTGGGGCTCCTTTGGCTTCACATCCTGATGTAGACAAGATTTCCTTTACCGGAAGTTCTGCAACTGGAAGCAAAATTATGCAAGCTGCAGCTCTGCAAGTCAAGCCTGTTTCACTAGAGCTTGGTGGAAAAAGTCCAATTATTGTTTTTGACGATGTTGACATTGATAAGGTTGCTGAATGGACCATGCTGGGCTGTTTCTATACCAATGGTCAGATATGTAGTGCAACATCTCGGCTTATTGTCCATGAAAATATAGCAACAAAGTTTTTGAATAGGCTTGTGGAATGGGCTAAAAACATCAAAGTTTCAGATCCCTTGGAAGATGGTTGCAAATTAGGCGCCATTGTTAGCGAAGCTCAGTATCAAAAAGTTCTCAAGTTTATTTCAACTGCTAAGAGTGAGGGTGCAACAATTTTGACCGGAGGGTCTCGCCCCGAGAATTTAAAGAAGGGTTACTTTGTTGAACCAACCATTATAACTGATGTGAGTACCTCAATGCAAATTTGGAGAGAGGAAGTTTTTGGACCTGTGCTCTGTGCCAAAACATTTAGCAGTGAGGAAGAAGCCATTGAACTAGCAAATGATACCCACTATGGCTTAGGGTCAGCTGTGATGTCAAATGATCCAGAAAGATGTGAGCGGATATCCAGGGCTGTTCAGGCTGGAATTGTATGGATCAATTGTTCTCAACCAACTTTCATTCAAGCCCCATGGGGTGGCATTAAACGTAGTGGGTTCGATCGCGAATTAGGAGAATGGGGACTTGATAATTTCCTGAGTGTGAAGCAAGTTACAAAGTATATTTCTGATGAACAGTGGGGCTGGTATAAGTGTCCTTCAAAGATGTAA 1506 0.4389 MAISTPRRELFIDGEWKAPLLNNRIPILPLQHMVGDIPAATKEDVELAVDAARRALSRNKGRDWSTASGSLRAIYLRAIAAKITEKKDELAKLEATDNGKPLDEAAADMDDVISCFSYYAELAEGLDAKQKAHVSLPMENFKSYVIKEPIGVVALITPWNYPLLMAAWKVGAALAAGCTAVLKPSELASVTCLELAEICKEVGLPAGVLNVITGLGTEAGAPLASHPDVDKISFTGSSATGSKIMQAAALQVKPVSLELGGKSPIIVFDDVDIDKVAEWTMLGCFYTNGQICSATSRLIVHENIATKFLNRLVEWAKNIKVSDPLEDGCKLGAIVSEAQYQKVLKFISTAKSEGATILTGGSRPENLKKGYFVEPTIITDVSTSMQIWREEVFGPVLCAKTFSSEEEAIELANDTHYGLGSAVMSNDPERCERISRAVQAGIVWINCSQPTFIQAPWGGIKRSGFDRELGEWGLDNFLSVKQVTKYISDEQWGWYKCPSKM 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03886 501 Pfam Aldehyde dehydrogenase family 31 483 IPR015590 GO:0016491
Arst5g03886 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 481 IPR016162 GO:0016491
Arst5g03886 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 285 296 IPR016160 GO:0016491
Arst5g03886 501 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 276 - -
Arst5g03886 501 Coils Coil 76 96 - -
Arst5g03886 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 257 264 IPR029510 GO:0016491
Arst5g03886 501 SUPERFAMILY ALDH-like 5 484 IPR016161 GO:0016491
Arst5g03886 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 265 456 IPR016163 GO:0016620
Arst5g03886 501 CDD ALDH_F10_BADH 34 485 - -
Arst5g03886 501 FunFam Betaine aldehyde dehydrogenase 261 452 - -
Arst5g03886 501 PANTHER ALDEHYDE DEHYDROGENASE 4 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03886 Arst-Chr5 99911010 99918919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03886 1 499 Aldehyde Dehydrogenase Gene Family AT1G74920 75.000 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03886 K00130 - gmx:100170755 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03886 5 99911010 99918919 Arst5g03245 5 90344644 90354119 PCT