Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03873 ATGGTGGCAAGATCATACACCAATTTGTTGGACTTAGCGTCAGGGAATATTTTAAACACCCCTCAAACTCCAAGAGCACTTCCGCGAGTTATGACTGTTCCCGGAGTTATCTCTGACGTAGAAAGCAAGCAAAGCAGTGAGGATTCTTTCCAGTCGGAACAGCGTCAGAAGATAATTATTGTATCAAGTTTTCTTCCTCTTGATGCTAAGAAGGATAAGTCTTCTGGAAAATGGAGTTTCAGTTATGACAAGGACTCAATTTTTTGGCAGTTAAAAGATGGTCTCCCTCCTGAAGTTGATGTTGTTTATGTGGGATCTCTGACGGTTGATGTTGATGCTAGTGAGCAAGAGCAAGTTTCTAATCAGTTGCTGGAGGAATTCAAGTGTGTGCCTACTTTTCTTCCTTCCGAAATCGAGGATCAGTTCTATAATGGATTCTGCAAGCAACATTTATGGCCTCTATTCCATTACATGCTGCCAATGTATCCAGGTTATAGCAATCGCTTCGATAGGACACTGTGGCAGGCTTATGTTTCTGCCAATAAGATATTTGCAAATAAAGTCACAGAGGTAATTAACCCGGACATAGATTATGTTTGGGTTCATGATTACCAATTAATGGTTCTTCCGACATTCCTGCGAAAGCGTTACAGCAGGATCAAGCTTGGTTTCTTCTTGCATAGTCCCTTTCCTACATCCGAGATATATCGAACTCTGCCGGTCAGAGGTGAAATTTTGAAAGCTCTGCTAAATGCAGATTTAATTGGTTTTCACACATTTGATTATGCTCGCCATTTTCTCTCCTGCTGCAGTCGAATGCTTGGCTTGGAATATGAGTCCAAGAGGGGCTACATTGGGCTCGAGTACTTGGGCCGAACAATATACATCAAAATACTACCTGCTGGGATTCATATGGGAAGACTTCAATCTGTCTTAGATCATACTTCTTCTACTACCAAAGCAAGAGAAATCTATGAACAATTCAAGGGGAAACAACTTATTGTTGGTGTTGATGACATGGACATATTTAAAGGTATAAGTTTAAAGCTCTTGGCGCTTGAACAACTCCTGGAGGAATATCCGACACTTCGTGGCGAATTGGTCATGGTCCAAATCTTGAATCCACTGAGGGGTTCTAGCAAGGATATTGAGGATGCAAAGGAGGAAGCATACATCACTGCTAACAGGATAAATCAAACTTTTGGTTTTCAAGGTTATGAACCTGTCATCATCATCGATCGCCATGTTCCTTTCTATGAGAAGGCAGCCTATTATGCTATGGCAGAATGTTGCATTGTGAATGCGTTGCGCGACGGAATGAACTTGGTTCCATACAAGTACATTGTCTGCAGGCAGGGAAGTCCTAAAATGGATGAAGCTTTAGAAATCGACCATGATTCTGAGAGGACGAGTGCACTTGTTGTTTCTGAGTTTATAGGTTGCTCCCCATCTCTCAGTGGAGCAATCAGGGTGAATCCATGGGACATTAGTGCTGTAGCTGATGCTCTATATTCGGCTGTTACAATGTCTAATGCAGAGAAAATTTTGCGGCATGAGAAGCACTATAGATATGTTAGTTCTCATGATGTGGCTTACTGGGCTAAAAGTTTTGAACAAGATCTTGTGATGTCATGCAAGGATCACCGTAGTAAGAACCATTGGGGCCTCGGCTTCGGCCTGAATTATCGAGTCTTGTCCCTCTCTCCCAATTTCAGGAAGCTTTCGGATGGCCACATTGTCTCTGCATATAAACGTACAAGTCACAGGGCAATCTTTTTGGATTATGATGGCACAGTTGTACCTCAATCTTCCATTGATAAATCACCCAGCCCTCAGGTTATATCGGTGCTGAATGATCTTTGCAGTGATCCTAAGAACACAGTGTTTATTGTCAGTGGCCGCGGGAAATCCTCATTGGGTGATTGGTTTGATCAATGCAAGAATCTTGGTATCGCAGCTGAACACGGCTATTTTATCAGGTGGGGTAACAAGTCAAACTGGGAAATGAGCCACATAAGCACAGATTTTGCTTGGAAAAAGATTGCTGAACCTGTGATGAGGTTGTATACCGAAGCCACTGACGGCTCGTATATAGAGACCAAAGAGAGTGCCTTGGTGTGGCATTACTATGATGCCGACCCGAATTTTGGATCTTGGCAAGCCATGGAGCTTTTGGATCACCTGGAGAGTGTTCTTGCAAATGAGCCTGTGGTCGTTAAGAAGGGACAGCACATTGTTGAAGTCATGCATCAGGGAATTACAAAAGGGCTAGTTGCACAAGACGTGCTGTCTAAGCTAGCCAGTGCTGGAAAATCCCCAGATTTTGTGCTGTGCATTGGGGATGACAGATCCGACGAGAACATGTTCGAGGCCATATTAACCAAATCTTATAACGCAAACACCTCTGCAGCACCAGAAATCTTTGCATGTACTGTCGGGCAGAAACCAAGCAAGGCGAGGTACTACTTAGACGATACGGCCGAGGTGACAATGCTACTTGAAGCTCTTAGTACTGCTTCAGAGCCTCTAACAACATTTTCTGCAGAAGCTTCTTCTCAAAATGCAAAATCTTGCTTTGAGAATATTGGTCACGTGCCTGATTTAGTGTGA 2610 0.4322 MVARSYTNLLDLASGNILNTPQTPRALPRVMTVPGVISDVESKQSSEDSFQSEQRQKIIIVSSFLPLDAKKDKSSGKWSFSYDKDSIFWQLKDGLPPEVDVVYVGSLTVDVDASEQEQVSNQLLEEFKCVPTFLPSEIEDQFYNGFCKQHLWPLFHYMLPMYPGYSNRFDRTLWQAYVSANKIFANKVTEVINPDIDYVWVHDYQLMVLPTFLRKRYSRIKLGFFLHSPFPTSEIYRTLPVRGEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYLGRTIYIKILPAGIHMGRLQSVLDHTSSTTKAREIYEQFKGKQLIVGVDDMDIFKGISLKLLALEQLLEEYPTLRGELVMVQILNPLRGSSKDIEDAKEEAYITANRINQTFGFQGYEPVIIIDRHVPFYEKAAYYAMAECCIVNALRDGMNLVPYKYIVCRQGSPKMDEALEIDHDSERTSALVVSEFIGCSPSLSGAIRVNPWDISAVADALYSAVTMSNAEKILRHEKHYRYVSSHDVAYWAKSFEQDLVMSCKDHRSKNHWGLGFGLNYRVLSLSPNFRKLSDGHIVSAYKRTSHRAIFLDYDGTVVPQSSIDKSPSPQVISVLNDLCSDPKNTVFIVSGRGKSSLGDWFDQCKNLGIAAEHGYFIRWGNKSNWEMSHISTDFAWKKIAEPVMRLYTEATDGSYIETKESALVWHYYDADPNFGSWQAMELLDHLESVLANEPVVVKKGQHIVEVMHQGITKGLVAQDVLSKLASAGKSPDFVLCIGDDRSDENMFEAILTKSYNANTSAAPEIFACTVGQKPSKARYYLDDTAEVTMLLEALSTASEPLTTFSAEASSQNAKSCFENIGHVPDLV 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03873 869 NCBIfam trehalose-phosphatase 588 836 IPR003337 GO:0003824|GO:0005992
Arst5g03873 869 Gene3D - 588 705 IPR023214 -
Arst5g03873 869 Gene3D - 719 848 IPR023214 -
Arst5g03873 869 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 50 309 - -
Arst5g03873 869 Pfam Trehalose-phosphatase 592 826 IPR003337 GO:0003824|GO:0005992
Arst5g03873 869 SUPERFAMILY HAD-like 589 836 IPR036412 -
Arst5g03873 869 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 588 705 - -
Arst5g03873 869 Pfam Glycosyltransferase family 20 57 541 IPR001830 GO:0003824|GO:0005992
Arst5g03873 869 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 57 541 - -
Arst5g03873 869 Gene3D Glycogen Phosphorylase B; 310 526 - -
Arst5g03873 869 FunFam Alpha,alpha-trehalose-phosphate synthase 311 526 - -
Arst5g03873 869 Gene3D Glycogen Phosphorylase B; 48 309 - -
Arst5g03873 869 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 718 849 - -
Arst5g03873 869 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 837 IPR001830 GO:0003824|GO:0005992
Arst5g03873 869 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 837 IPR001830 GO:0003824|GO:0005992
Arst5g03873 869 CDD HAD_TPP 590 829 - -
Arst5g03873 869 CDD GT20_TPS 57 541 IPR001830 GO:0003824|GO:0005992
Arst5g03873 869 NCBIfam HAD-IIB family hydrolase 590 791 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03873 Arst-Chr5 99703325 99709425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03873 1 862 Trehalose Biosynthesis Gene Families AT1G23870 65.127 0.0 1212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03873 K16055 - gmx:100812031 1357.43