Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03859 ATGCATTGGTTGAAGCAAAAAGGGAACGGGAATGGGAGCATGAGGTCGTCAGGGAGGAGGCTGTCCCTTGGGGAGTACAAGAGGGCGGTGTCATGGTCGAAGTACTTGGTGTCTCCCGGTGCGGCGATCAAGGGAGAAGGCGAAGAGGAATGGAGTGCTGACATGTCTCAGCTTCTCATTGGTTCCAAGTTCGCCACGGGAAGGCACAGCAGGATCTACAGAGGTGTATACAAGCAGAAGGATGTGGCCATCAAGCTTGTAAGCCTGCCTGAGGAGGATGAGGATCTTGCTTCTTTTCTTGAGAAACAATTCACTTCTGAGGTCTCCTTGCTCCTCCGCTTGCGCCATCCCAATATCCTCACTTTTATTGCAGCCTGCAAGAAACCTCCTGTCTTTTGTATAATTACCGAATACTTAGCCGGCGGATCATTGAGAAAATATCTGCATCAGCAACAATCAAATTCAGTTCCACTCGAAATTGTTCTGAAATTAGCCCTTGACATTGCACGGGGGATGCAATATCTTCACTCTCAGGGGATACTTCATAGGGATCTCAAATCAGAAAATCTGCTTCTGGGGGAAGATATGTGTGTAAAAGTAGCAGATTTTGGTATCTCTTGCTTGGAATCTCAGTGTGGTAGCGCGAAAGGATTCACCGGAACTTACCGGTGGATGGCTCCGGAAATGATCAAAGAAAAGCATCACACTAAGAAAGTTGATGTCTATAGTTTTGGCATAGTTCTATGGGAGATTTTAACAGGACAGACACCATTTGAAAACATGACACCAGAGCAAGCTGCATTTGCAGTTTCCCACAAGAATGCAAGGCCACCATTGCCATCTGAATGTCCATGGGCACTAAGTGACCTAATAAACAGATGCTGGTCAAGCAATGCAGATAAGAGGCCACATTTTGATGAGATAGTTCCCATTTTGGAGAACTACACAGAATCATTGGAGCAGGATCCCGAGTTCTTCAAAATATACAAACCTCGCCCTTCTAATAACACAACAATTCTTGGATGCATACCTAAGTGCAATACTCGCCATAAATCTACTGCTTGCAAAGTTTAA 1074 0.4544 MHWLKQKGNGNGSMRSSGRRLSLGEYKRAVSWSKYLVSPGAAIKGEGEEEWSADMSQLLIGSKFATGRHSRIYRGVYKQKDVAIKLVSLPEEDEDLASFLEKQFTSEVSLLLRLRHPNILTFIAACKKPPVFCIITEYLAGGSLRKYLHQQQSNSVPLEIVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWEILTGQTPFENMTPEQAAFAVSHKNARPPLPSECPWALSDLINRCWSSNADKRPHFDEIVPILENYTESLEQDPEFFKIYKPRPSNNTTILGCIPKCNTRHKSTACKV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03859 357 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 315 - -
Arst5g03859 357 Gene3D Transferase(Phosphotransferase) domain 1 141 341 - -
Arst5g03859 357 Gene3D Phosphorylase Kinase; domain 1 48 139 - -
Arst5g03859 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Arst5g03859 357 SUPERFAMILY Protein kinase-like (PK-like) 48 311 IPR011009 -
Arst5g03859 357 FunFam Serine/threonine-protein kinase isoform 1 48 140 - -
Arst5g03859 357 CDD STKc_MAP3K-like 60 312 - -
Arst5g03859 357 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Arst5g03859 357 PRINTS Tyrosine kinase catalytic domain signature 220 230 IPR001245 GO:0004672|GO:0006468
Arst5g03859 357 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Arst5g03859 357 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Arst5g03859 357 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
Arst5g03859 357 Pfam Protein tyrosine and serine/threonine kinase 60 311 IPR001245 GO:0004672|GO:0006468
Arst5g03859 357 ProSiteProfiles Protein kinase domain profile. 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03859 357 SMART serkin_6 58 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03859 Arst-Chr5 99339656 99345109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03859 31 321 MAP Kinase Kinase Kinase AT1G62400 63.390 1.98e-135 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Arst5g03859 PK_Tyr_Ser-Thr 6.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03859 - - gmx:100807757 631.713