Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03834 ATGGCTACTTCATTCAACATGATTAAGGATCTTGATATTGCTGTTGCTAATCAAGTTTGGCGTATCAAAGTGCGTGTCATCAAAATATGGTCTATTAATTTAAGCGAAGAGAAGTTCAGGAGACCTAACTTAGAGATGGTTGTTATGGATGAATTAGGTGATCGGATACAATGTTCTGTAAGGAATCCTTTGAGGAGATTATTTGAGCAGGAGTTAGTTGAGGGCAATGTGTACTCTGTTGCTAACTTCTCTATTGAACTTAATGATCAAAAGTACAAGCCAACCAATCATACTCTGCGTGTGTTCTTTAAAAGGGAATCTCAAATTCGTGTGTTAGTCGATATTAATTTCCCAAACAATATTTTTCACTTTGTGCCCAATGAAATGATACTTAATCATGATAATCCTCAGTCTCACTTGATAGATGTTATTGGGTTGTTGACTGGAAAGGGTGATATAATAGAGTTCAGTAAGAATGGAAAGAAGTCCATATACATGGTTATTGAGCTTGATGACATGCAATCTAAGGGTAAGATAAGGTGTACATTGTGGGAGGAGTTTGCTACTCAACTGGTGAAGCATATGGAGCAGTACCCTAATACTGAGTTCATTATTATTGTGCAGTTTGCCAAATTTAACCTGTTCAAGGGAACCATGGGCATATCTAATACAAACTACAACTCTACCTTATACATTAACGCTGATCTTAAAGAAGTTAAGGAATTTAGACAAAGGTTTATCATGGGTAATGACAAGCCATCTAACCAGCTTTCTCAAATTGCATCTGATTCATTGATTTCCCTTGAGCAAGATCTTATTAACCATACTCCTTACAAGTCTATAAGCGAACTTAAGGAGAGCACTGAGGGTGGAATATTTGTTACCATTGGAACTGTGATTTCTATTGACACTAGACTAGGTTGGTGGTACAAAGGGTGCAAGATGTGTTTTCATTCACTTAAAGAAGATGAGAATTCATATTATTGCCATGAATGTGATATTTATCCTAATACTCATGTTCCTCGTTTCTGCATTCAAATGAGAGTATCAGATGAGACAGACTCTGCTTCATTTATTGTTTATGACAAGGAAGCCTCCAAATTTCTTGAGATATCTGCTTCTGAGCTTCGTTTGAGACAGATATCAAAGGGTTGCGGCAAGGATGAATTTCCCGTTGAGATTAATTCATTTAGGGGTAAGAAGTTTCTATTCAAGATTTCTGTGAAGCTTGATGATATCAATGCTTTCCAGCCATGCAAGATTACTGTTTTGAAGTTGACTGAAGATCCAAATCTGCTCACTTCTTTTTCTTCCAAGTACAAGACATTTGATAACACCCCAATCGAAAATACTGAGTTGCAGAGTTTGCAAACTGATTCTACTGATAATTCTAAGGAGATTAGTTCACAGTCTTGCGAAATTATTTCTCTTGATGGCAATGATGACTTTGTAACTCCTAAGAGAGGTATGATAGCTGGTGTAACGGCAAAAAATTTGCTGGACATTTTCCCGGATAATGCCACTACTTCATCATCCAAATGCCGGAAGCTCTCCAAGGAGTCTGATTTTGTTGATGTATTCGATGACATTAATTTAGAAAGTGATTACTCTATTGATTTTCAAGACGACAATGTCATTGATGAAAGTGCGACTGCATACGAGATTGACAGCTTAGTTATTGATGAAGAAGCTTTTTGGGATGCGGGTGATCCTTCTCATACATGTATATATTGCAAAGCTTTGATGTGGGATCATGAGAGACTTTCAAAGAGTATCAATAGTGTCACTCCTCATTTTGGTTTGTGCTGTATGGATGGCAAAGTTGAGTTGCCCCTAATGAAACAGGCCCCAGATAATCTAAAAGCATTGTATTTTTTGGACGATGAAATGGGCCGATACTTTCGAAAAAACATAAGGGCATTTAATGCAATGTTTTCATTCACATCAATGGCTGGCAAGATTAACCATAAAATTAACAATGGTTCCGGTCCGCCGTCATTTATTTTGAGTGGCCAGAACTATCACTCAATCGGAAGTCTTATTCCACAAGCAAATGAAAAACCAAGATTTGCACAGCTCTACATTTATGATACGGACAACGAGATTCATAACAGCATTAGTGCTGTTCTCCCAGTAAGTTCGGTGGGTAATCTTGAACATGATATAGTTTGTATGCTGAAAAATATGCTAGATGAGCATAATCCTTTGGCACAGTCGTTCCGTTATGCTCGGGATAGATTCACCGAGTCACATTCTCTTGATATGAAGTTAAAACTGATTAGGCGTAGGGAAAAAGATGGTCGGCGATACAACTTGCCTACTGCATCAGAAGTTGCAGCATTGGTAGTTGGTGACATTGATGATTCTTTATTGGACAGAGATATCATATTGGAAACCAAATCAAAACAACTAAAGAAGATTGATGTTATCCATCCATTGTATTTGGCTTTGCAGTATCCTCTTATTTTTCCATACGGTGAGGATGGATATAGAACAGGCATCTTAGCAGCTTCTCGATACAACGTTGACGGTTCAAAGAAGAGGAATACAATAAGCATGAGGGAATTCTTTGCATTTCGACTGCAAATGAGGTCATCTGAGTCACCAATTCTGCTTAACTCCCGTAGGTTGTTCCAACAGTTCTTGGTTGATGCATATACTATGGTAGAGTCTGAGCGTCTTAGTTTTCTTCGTTTCAACCAACCAAAGTTGAGGGTTGAAAAGTACAAGTTATTGCATGAGTCTTTAGTTAGAGGTGAAGCAGATGCTGTTTCAAGTGGTCAAAGAATAATTCTCCCAAGCACTTTTACGGGTGGACCTAGATACATGTTTAATAATTGCAAGGATGCATTTGCTCTTTGCAAGCATTTTGGTTATCCAAGTTTTTTAGTCACCATCACATGCAATCCTGAATGGGATGAGATAAAGCGCTTATTAATTGGTACTGGCCTTAAAGCAGAAGATCGTCCTGATATTACATCAAGAGTCTTTAAGATTAAGCTAAACAACTTAATCAGAGATTTTAAGTATGGTGATATTTTTGAAAAGATTTCTGGATATGTATGCACTATTGAATTTCAGAAGAGGGGTCTTCCTCATGCTCATATTTTGTTGTTCATGCATCCTCTTTCAAAACCTAGGTCTCCTGATGATATAGATAAGTTAATATCGGCACAAATACCCGATAAACGTCGAAGGCCTAAGTTATATGCTGCTGTTGAGAAATTCATGGTTCATGGTCCATGTGGCAAGTATAACAAGAATAGTCCTTGCATGGTAAATGGTTTGTGCTCCAAATATTTTCCCAAACAATTTAGACAACGTACTGTTGTTGATGAAGCTGGGTTCCCAAAGTATTGTAGGCCAAAAAATGGTCGCACCATAATAAAAAAGGGTGCAACTCTTGATAACTCTTTTATTGTCCCGTACAACCCAACTTTGTTATTAAGGTATGGTTGTCACATTAATGTTGAGCATACTTGCCAAACTTCTGCCATCAAATATTTATTCAAGTATGTTCACAAAGGAAATGATCGTGTTACTGCTTCATTCTACCAGACATCAGTTAATGGTAATGCTCCTCCTATTGTGGATGAGATTAACAACTATTATGATTGTAGATACATTTCTGCATGTGAAGCTGCTTGGAGATTATATGGTTATGATATTCAAGTTAAGGAGCCTGCTGTTATCAGACTTCCATTTCACCTACCAGATGAGAATCCTGTTATTTTCAAGGAATACGAGGGTATTCAGGATGTCCTTAGTCGTGTTGATGCGAAGTTCACTAAATTACAAGCATGGTTTGTTGTGAATAAATATTTTCCATTGGCTAGGTCATTGACCTATTGTGAGTTTCCACAGAAATTTGTATGGAAGGACGATATTTCAATGTGGATTCCAAGGAAACAAGGTTATTCTATTGGTAGGTTGACACATGTTCCTAGAGGTAATGGCGAGGATTATTATCTTAGACTTCTTCTCAACATTCAGAAAGGTTGCACCAGTTTTGAGGAAATACGCACTGTTGATGGTGTTACACACAACACTTTCAAAGAAGCATGCTATGCACTAGGTCTCTTGCAAGACGACAAAGAATTTATTGATGCTATTCTTGAAGCAAGTACTTGGGCTTCAGCCAACTATGTTCGTGACCTTTTTGTCATGCTTCTGATATCAAACAACATAGCATGTCCAGATTTTGTCTTAGAAAGATGCTACAAAGAATTATCTGAGGATATTTTATTTGAGCAAAGAAGAATTCATCATGTTCAAGATCTTCATTTGTCTGACGAGCATATCATGAACTTGACCCTTGCAAAAATTGAAGACAAGATGCAAGCTAATGGAAGGTCTCTTAAAGAGTTTCCAGCGATGCCCTACCCATCATTAGATCTTTTTCATGGTTTAGAAGATCGCTTATTGTTGGACGAGGTTAATTTTGATCGTTCTTTGCTTAAGCAGCAATATATGCAATCTCTAAAGACCATGACAGATGAGCAACGATCTGCATTTGACACCATTGTTGATTCCGTAAACAATGATCGCGGCGGATTTTTCTTTCTATATGGTTATGGTGGTACTGGCAAGACGTTCATCTGGAATACTCTTTCTGCTTATCTTAGATGTGGTGGGAACATTGTTCTTAATGTTGCTTCAAGTGGCATTGCTTCTTTACTACTTCCTAATGGTCGTACTGCTCACTCAAGATTTAAAATACCATTAAGCATCAATGAGGACTCGATATGCAACATAAAGCCGGGAACACCTCTTTGTAAACTTATTTGTAAAGCAAAGCTTATTATATGGGATGAGGCACCAATGTTAAGTAAGTATTGTTACGAAGCTCTTGACAAGTCTCTAAAAGACATCCTTCGCTTTCAGCCATCGTTTAATCCAAACCTTCCATTTGGTGGCAAAGTTGTTGTACTTGGCGGAGACTTCAGGCAGATTCTTCCAGTAATACCTATGGGTTCACGGCAAGATATTGTGCAAGCATGCATTAGTTCATCTTATCTATGA 5022 0.3775 MATSFNMIKDLDIAVANQVWRIKVRVIKIWSINLSEEKFRRPNLEMVVMDELGDRIQCSVRNPLRRLFEQELVEGNVYSVANFSIELNDQKYKPTNHTLRVFFKRESQIRVLVDINFPNNIFHFVPNEMILNHDNPQSHLIDVIGLLTGKGDIIEFSKNGKKSIYMVIELDDMQSKGKIRCTLWEEFATQLVKHMEQYPNTEFIIIVQFAKFNLFKGTMGISNTNYNSTLYINADLKEVKEFRQRFIMGNDKPSNQLSQIASDSLISLEQDLINHTPYKSISELKESTEGGIFVTIGTVISIDTRLGWWYKGCKMCFHSLKEDENSYYCHECDIYPNTHVPRFCIQMRVSDETDSASFIVYDKEASKFLEISASELRLRQISKGCGKDEFPVEINSFRGKKFLFKISVKLDDINAFQPCKITVLKLTEDPNLLTSFSSKYKTFDNTPIENTELQSLQTDSTDNSKEISSQSCEIISLDGNDDFVTPKRGMIAGVTAKNLLDIFPDNATTSSSKCRKLSKESDFVDVFDDINLESDYSIDFQDDNVIDESATAYEIDSLVIDEEAFWDAGDPSHTCIYCKALMWDHERLSKSINSVTPHFGLCCMDGKVELPLMKQAPDNLKALYFLDDEMGRYFRKNIRAFNAMFSFTSMAGKINHKINNGSGPPSFILSGQNYHSIGSLIPQANEKPRFAQLYIYDTDNEIHNSISAVLPVSSVGNLEHDIVCMLKNMLDEHNPLAQSFRYARDRFTESHSLDMKLKLIRRREKDGRRYNLPTASEVAALVVGDIDDSLLDRDIILETKSKQLKKIDVIHPLYLALQYPLIFPYGEDGYRTGILAASRYNVDGSKKRNTISMREFFAFRLQMRSSESPILLNSRRLFQQFLVDAYTMVESERLSFLRFNQPKLRVEKYKLLHESLVRGEADAVSSGQRIILPSTFTGGPRYMFNNCKDAFALCKHFGYPSFLVTITCNPEWDEIKRLLIGTGLKAEDRPDITSRVFKIKLNNLIRDFKYGDIFEKISGYVCTIEFQKRGLPHAHILLFMHPLSKPRSPDDIDKLISAQIPDKRRRPKLYAAVEKFMVHGPCGKYNKNSPCMVNGLCSKYFPKQFRQRTVVDEAGFPKYCRPKNGRTIIKKGATLDNSFIVPYNPTLLLRYGCHINVEHTCQTSAIKYLFKYVHKGNDRVTASFYQTSVNGNAPPIVDEINNYYDCRYISACEAAWRLYGYDIQVKEPAVIRLPFHLPDENPVIFKEYEGIQDVLSRVDAKFTKLQAWFVVNKYFPLARSLTYCEFPQKFVWKDDISMWIPRKQGYSIGRLTHVPRGNGEDYYLRLLLNIQKGCTSFEEIRTVDGVTHNTFKEACYALGLLQDDKEFIDAILEASTWASANYVRDLFVMLLISNNIACPDFVLERCYKELSEDILFEQRRIHHVQDLHLSDEHIMNLTLAKIEDKMQANGRSLKEFPAMPYPSLDLFHGLEDRLLLDEVNFDRSLLKQQYMQSLKTMTDEQRSAFDTIVDSVNNDRGGFFFLYGYGGTGKTFIWNTLSAYLRCGGNIVLNVASSGIASLLLPNGRTAHSRFKIPLSINEDSICNIKPGTPLCKLICKAKLIIWDEAPMLSKYCYEALDKSLKDILRFQPSFNPNLPFGGKVVVLGGDFRQILPVIPMGSRQDIVQACISSSYL 1673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03834 1673 PANTHER UNCHARACTERIZED 902 1671 - -
Arst5g03834 1673 CDD RPA1_DBD_B_like 142 247 - -
Arst5g03834 1673 SUPERFAMILY Nucleic acid-binding proteins 4 116 IPR012340 -
Arst5g03834 1673 Gene3D - 269 434 IPR012340 -
Arst5g03834 1673 CDD RPA1_DBD_C 281 435 IPR047192 -
Arst5g03834 1673 Pfam Replication factor-A C terminal domain 294 427 IPR013955 -
Arst5g03834 1673 Gene3D - 1494 1672 IPR027417 -
Arst5g03834 1673 SUPERFAMILY Nucleic acid-binding proteins 136 246 IPR012340 -
Arst5g03834 1673 Pfam Helitron helicase-like domain at N-terminus 856 1038 IPR025476 -
Arst5g03834 1673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1438 1667 IPR027417 -
Arst5g03834 1673 CDD RPA1_DBD_A_like 21 109 - -
Arst5g03834 1673 Pfam PIF1-like helicase 1497 1673 IPR010285 GO:0000723|GO:0003678|GO:0006281
Arst5g03834 1673 Gene3D - 115 256 IPR012340 -
Arst5g03834 1673 SUPERFAMILY Nucleic acid-binding proteins 276 429 IPR012340 -
Arst5g03834 1673 Gene3D - 7 114 IPR012340 -
Arst5g03834 1673 Pfam Domain of unknown function DUF223 45 132 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03834 Arst-Chr5 98944757 98968458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03834 20 423 Core DNA Replication Machinery Family AT5G08020 23.684 2.00e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03834 - - adu:107490971 3375.1