Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03812 ATGCATGGGTCCGGTTCTGAGGAGTGGAAACACAGCCGGCACATGTGGCCCAACGCCACTGCTGTAGCCCCCGATTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTTATGTTGGTGATTGTGCACTTTTCAAGCCACCCCGGCATTCCCCACCTTTTATTGGAATAATTCGCAAGTTAATATTTAATAAAGAAGAAAGTCCAACTTTAGAAGTTAATTGGCTTTACCGACATGCTGATGTGAAGCTTACCAAGGGCGTATTGGAAGCTGCCCCAAACGAAGTCTTCTACTCATATCACAAGAATGAAATATCTGCTTCATCATTACTCCATCCGTGTAAAGTCGCGTTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCTGCGTTTGTCTGCAGGCGAGTGTATGACACTGAGAACAACTGTATATGGTGGCTAACCGATAAGGAATACATTAATGCTGTTCCGGAAGAAGTTGACCGGTTATTAGACAAGACAAAACTAGAAATGCATGGGGCAGCGCAGTCGGGAGGCCGTTCTCCAAAACCTTTGAATGGTCCGACATCAACACAATCTTTGAAATCTGGTTCTGATAGTGTTCAAAATAGTTCTTCCTTTGGTACACAGGTTAAAGGAAAAAAGAGAGAAAGGGGTGATCAGGGTTCTGATTTATCTAAACGAGAGCGACTATTTAAAGCAGAAGATGGGGATTTTGGCCCAGTTAGATCTGAGAGCATGTTGAGGAGTGAGATCAGTAAAATTACTGACAAAGGTGGGCTTGTAGACTTTGAAGGAGTTGAAAGACTTGTACAACTCATGCAACCTGATGGTGCTGATAAAAAAATAGATTTGGGTGGGAGAATAATCCTTGTTAATGCAATAGCAGCAACCGAGCGTGATGATTGTCTTAGCTGGTTTGTACAGCTCAGGGGTTTACCTGTGCTGGATGAATGGCTCCAGGAGGTTCACAAGGGAAAAAATGGTGATAGTAATACCCCTAAAGAAAGCGACAAATCAGTTGAGGAATTTTTGTTAGCCTTGCTTCGTGCATTGGATAGGCTTCCTGTGAACCTTCATGCATTGCAAACATGCAATGTTGGGAAGTCTGTTAATCATTTACGCACTCACAAAAATTCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTAGATACATGGAAGAAACGTGTTGAGGCTGAAATGAATATGACCGATTCGAAATCTGGTTCTACACGTCCTGTGTCTTGGCAAGCAAAACCGGCAGCTTCTGAGATCTCTCATGTTGGAAATAAGAAAACTGGAGGATCTGAGAATGCTACAAAGGGATCTGCAATTCAATCATCAGTATCCAAAAATTCATTGGCTAAGCATGGTTCTGGGGAAGCATTGTCCAAGTCTTCTTCAGCTCCTAGCTCAATTAAATTGATGACTACCTCAATGGGCTGTACCCCTAAAGATCAGAATGTGAAGGCATTAGGTGGTGCCCCAGCATCAGATCAACCTCTGACACCTATCAAGGAGGAAAGGAGCAGCAGTTCTAGTCAGTCCCAAAACAACAGCTTATCTTGTTCTAGTGAACATGCAAAAACAATTGGGTCTTGTAGGGAAGATTCTAGGAGTTCCACTGCTGTGTCAATGAGTGCGAGCAAAATACCTGGTGGTACATCTCGAACTCGGAAGTCAAGCAATGGAGTACATGGGGCTGGTGTTGCACTTGCTCAGAAGGAGCCCACCTCGGTAAAAGGCTCTACTAGAAACTCACCTTCTGAAAAAGTTTCACCAACTCGAGTTTCCCACGAAAAATCTTTTGATCCGCCACTTACTGATCAAGGGAATAATCAACGCCTTATTCTCAGACTGCCAAATACTGCCCGTAGTCCTTCAAGGGGAGCAAGCGGTGCTGCTTCTGAAGAACCTGCTATTCCTTGTGGCATAGCTTCGCCTCCTGCCGACAAGAATGAGTCTCGGGATAGAAGAGTTAAAGGTAAAAATGATGGTTTGCATACCATTGTTTCATCAAATGTGATAACTGATGCCTGTGCTTCTAATGAAGGTTCAACTGGCTGTGAGCATGGTAAGGGCTCTCCGATAGCTGATGAACAGGGAAGGATTAATGAAGATGGTGATCAGGTACCAGAAACATCGAAACAGAGTAATCTGTCATCAGGATTTATTTCCAGATCAGGGCAGACATATGCTGCTTCTTTAAGCCCTATGAATGCATTAGTTGAAAGTTGTGTCAAATTCTCCGAAGCTAGTGCCTCTGTCTCTGCTGGTGATGATGGGATGAACTTACTTGCTACCGTAGCTGCAGGCGAGATATCCACATCTGGAAATGTCTCTCCTCTGGCTTCACCTGAGAGGAAGTCTCCTGTGGTAGATGAATCCAGCTCTGGCAATGTTTCCAAGTTAAAGCATCCGGGTGAAATAGCTGCTCACACTGTTACACAATCTGATAGAAGGGCATCAGCAGAGCCTCTGTTGAATGCTGTTGATCCAGTGCAATTTAAAAATGATTCAAGGCACCCTGTGACCACAATATCACGTGGTTCTGCTGGAGAAGAAGCAAATTCAACCAGTTGTAAAGAGAAAACTGGTGATAACGGGCCCCAAATGAATGTCTCTACTGCAGATTTGTCACAAAATGCTGAATCTCCTCGCATACGGCCAGAAATTGCTGAGAGTGCTTCTGAAACTGTACCACCAGCTAAAAAGGAGACTTGGGAAGAGCCTGGAGGAGAGAACCATTTTCATGTGCAGAGGGATTTTGGAAGTCAATGGGTTAAACCCAGCAGTTCAGACTCTAAAAAGGAGATGGTTGATCACTTGGATGAGGCAGTCGTGAAGAATGATGAAATGCTAGTTTCCAAAGAGACCATTGCAGGTGTAAAGATTGAAAAGGAGTTAGGTGAAAAATTACTCGAGTTATCTTCAGATGTAGGTAAGGATAACAAGATCAGTACAGAGGTTACTGGCGTATCAGTGCAAAAATCATCTGTTGCAGAAAGCAGCGAGTCTGTAGAGTTTAAAAAGGTGGATGTGACGCCGCCTTCTGCTTCTGGTAATTCAAAGATAATTCGTCTGAAGGAGATTCTTGGTCAATGTTCTGGATCATCAAATCCCCCAGCGTTGTCCAAAGTTCCCGGGAAAGAAAATGAAGTGTCTAAAACTTCTGTGTGCAACTTAGATGGAAAGGAATCTGATGTTGCAGGTGAGCAGCATGCCCACAGTATTCATCCATCCCTCACTGTTGCTGGGTCTGATGCAGGTGTAATATTAGACTTCGATCTAAATGAGGGCTTCGCTGTTGATGATGCTAGCCATGGGGAGATTGTTCGGCAGGAAGAACACACCACATCATCTGCGGTCCATAATCCTTGTGCATTGCCTTTTCCCATTTCATCCATCTCTGGGGGATTCCATACAACAATTACAGTGGCATCTGCTGTCAAGGGGCGAGTTGTTCTACCAGAAAACCCATTGCGCAGTAAGGGTGAACTTGGATGGAAAGGCTCTGCTGCAACAAGTGCCTTCCGGCCAGCTGAACCTAGGAAAAATTCAGAGACACCGTCAACTACTGGAGATATTCCTTCTGTTGATTCCACATCTTCAAAACAAGGCCGTGCTCCTTTAGATTTTGATTTGAATGTTGCTGATGAAAGAAGTTTTGAGGATGTAGGTTCCCATGGTTCTTCAGAATCTGGGCCACCTGATCGCAGCACGATGGGACTTGATCTTGATTTGAACAGAGTTGATGAGACTCCTGATGCTGTTTCTTACTCTATGAGTAAACTGGATGCTCCTACATTGCCAAGTAAGTCTTCACTGTCTGGTAGGTTATCTAATGGTGGAAGTGTGTCAAGAGACTTCGATTTGAATAATGGACCAGGCCTTGATGAAGTTGGCACAGAGGTCCCAACTCGAATTCAGCAGATGAAAAATAGTGCACCGATTCCATCTGCCATCCATGGTACAAGAGCCAACAATGCTGAATATGGGAATTATTCATCATGGTTTCCCCCAGGAAATTCTTATTCTGCAATTACTGTCCCTCCACTTCTTCCTGGTAGAGGTGAACAGAGTTATGTTGCAGCTGCTGGAGCACAGCGGATAATGGGTCCCACTGGTAGTGCAGCGTTTGGTCCTGAACTCTACCGGGGGCCAGTGCTTTCATCTGCTCCTGCTGTTGCTTACCAACCTACTGCAGCACCCTTTCCATATCCAGGAGGATTTCCATTTGAAACTAGTTTTCCATTATCTTCAAACTCCTTTTCTGTTGGTTCAGCAACATTTATTGATTCATCAACAGTTGGTGGACTTTGCTTTCCTACTATGCCGTCGCAGCCAGTTGCACCTGGTGGTGTTGTCTCCTCAACATATCCGCGTCCATATGTCATGAGTCTTCCTGGGGGTACAAGTAATGTGATTCCTGACACCCGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCCGGTGGTACAGATACAGACAGGAGAGAGGAACATATGAAGATGTTTCAGGTGGCAGGTGTCTTGAAGAGAAAAGAACCTGATGGTGGTTGGGATGGAGCTGATAGATTCAGCTACAAACAGCCCTCATGGCAGTAG 4623 0.4456 MHGSGSEEWKHSRHMWPNATAVAPDSSPSQFICKDGRKIYVGDCALFKPPRHSPPFIGIIRKLIFNKEESPTLEVNWLYRHADVKLTKGVLEAAPNEVFYSYHKNEISASSLLHPCKVAFLRKGVELPSGISAFVCRRVYDTENNCIWWLTDKEYINAVPEEVDRLLDKTKLEMHGAAQSGGRSPKPLNGPTSTQSLKSGSDSVQNSSSFGTQVKGKKRERGDQGSDLSKRERLFKAEDGDFGPVRSESMLRSEISKITDKGGLVDFEGVERLVQLMQPDGADKKIDLGGRIILVNAIAATERDDCLSWFVQLRGLPVLDEWLQEVHKGKNGDSNTPKESDKSVEEFLLALLRALDRLPVNLHALQTCNVGKSVNHLRTHKNSEIQRKARSLVDTWKKRVEAEMNMTDSKSGSTRPVSWQAKPAASEISHVGNKKTGGSENATKGSAIQSSVSKNSLAKHGSGEALSKSSSAPSSIKLMTTSMGCTPKDQNVKALGGAPASDQPLTPIKEERSSSSSQSQNNSLSCSSEHAKTIGSCREDSRSSTAVSMSASKIPGGTSRTRKSSNGVHGAGVALAQKEPTSVKGSTRNSPSEKVSPTRVSHEKSFDPPLTDQGNNQRLILRLPNTARSPSRGASGAASEEPAIPCGIASPPADKNESRDRRVKGKNDGLHTIVSSNVITDACASNEGSTGCEHGKGSPIADEQGRINEDGDQVPETSKQSNLSSGFISRSGQTYAASLSPMNALVESCVKFSEASASVSAGDDGMNLLATVAAGEISTSGNVSPLASPERKSPVVDESSSGNVSKLKHPGEIAAHTVTQSDRRASAEPLLNAVDPVQFKNDSRHPVTTISRGSAGEEANSTSCKEKTGDNGPQMNVSTADLSQNAESPRIRPEIAESASETVPPAKKETWEEPGGENHFHVQRDFGSQWVKPSSSDSKKEMVDHLDEAVVKNDEMLVSKETIAGVKIEKELGEKLLELSSDVGKDNKISTEVTGVSVQKSSVAESSESVEFKKVDVTPPSASGNSKIIRLKEILGQCSGSSNPPALSKVPGKENEVSKTSVCNLDGKESDVAGEQHAHSIHPSLTVAGSDAGVILDFDLNEGFAVDDASHGEIVRQEEHTTSSAVHNPCALPFPISSISGGFHTTITVASAVKGRVVLPENPLRSKGELGWKGSAATSAFRPAEPRKNSETPSTTGDIPSVDSTSSKQGRAPLDFDLNVADERSFEDVGSHGSSESGPPDRSTMGLDLDLNRVDETPDAVSYSMSKLDAPTLPSKSSLSGRLSNGGSVSRDFDLNNGPGLDEVGTEVPTRIQQMKNSAPIPSAIHGTRANNAEYGNYSSWFPPGNSYSAITVPPLLPGRGEQSYVAAAGAQRIMGPTGSAAFGPELYRGPVLSSAPAVAYQPTAAPFPYPGGFPFETSFPLSSNSFSVGSATFIDSSTVGGLCFPTMPSQPVAPGGVVSSTYPRPYVMSLPGGTSNVIPDTRKWGSQSLDLNSGPGGTDTDRREEHMKMFQVAGVLKRKEPDGGWDGADRFSYKQPSWQ 1540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03812 1540 MobiDBLite consensus disorder prediction 185 213 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 1188 1212 - -
Arst5g03812 1540 SMART TFS2_5 323 402 IPR003617 GO:0005634
Arst5g03812 1540 MobiDBLite consensus disorder prediction 580 596 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 906 920 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 214 233 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 842 886 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 1164 1213 - -
Arst5g03812 1540 ProSiteProfiles TFIIS N-terminal domain profile. 324 403 IPR017923 -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 839 937 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 174 233 - -
Arst5g03812 1540 ProSiteProfiles BAH domain profile. 37 151 IPR001025 GO:0003682
Arst5g03812 1540 MobiDBLite consensus disorder prediction 1268 1292 - -
Arst5g03812 1540 Pfam TFIIS helical bundle-like domain 351 400 IPR017923 -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 507 566 - -
Arst5g03812 1540 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 270 404 IPR035441 -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 1519 1540 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 654 668 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 608 633 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 1260 1305 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 406 420 - -
Arst5g03812 1540 Pfam BAH domain 38 144 IPR001025 GO:0003682
Arst5g03812 1540 MobiDBLite consensus disorder prediction 432 488 - -
Arst5g03812 1540 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1540 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 779 808 - -
Arst5g03812 1540 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1540 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 699 713 - -
Arst5g03812 1540 SMART BAH_4 37 151 IPR001025 GO:0003682
Arst5g03812 1540 MobiDBLite consensus disorder prediction 1225 1248 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 1483 1504 - -
Arst5g03812 1540 Gene3D - 21 235 IPR043151 -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 404 670 - -
Arst5g03812 1540 CDD TFIIS_I 359 401 - -
Arst5g03812 1540 MobiDBLite consensus disorder prediction 687 727 - -
Arst5g03812 1540 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 306 413 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03812 Arst-Chr5 98549444 98557909 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Arst5g03812 BAH 6.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03812 - - gmx:112998769 1994.93