Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03772 ATGCACCAAAATTGGATTTTTGAGCACACCCATTTGAAGATGGCATGGATTCACCACCATATTCAACAAAAAGATGGTTACTTGAGCTACTACTACCCTCCACCACCACCACTACCACCACTATTACCGCCACCATATTTGTCCACACCTTCAACATCTTCTTCAGCTTCATCTTCATCTTCATCTTCATCACCATCTTCTGGTACTAGGATTAGTCCTGCTGTTCTTTTCATAATAGTAATTCTTGCAGTTTTATTCTTCATCTCTGGTGTCCTCCATCTGCTTGTTAGATTTCTCATGAAGCACCCGGTTTTTCAGTATAAGGAGATTGTGGGGCTGAAGGAGCCATTTGATTGTGCTGTTTGTCTGTGTGAGTTTTCTGAGAAGGATAACCTCAGGTTGTTGCCTATGTGCAGCCACGCCTTTCACATAAGTTGTATAGACACATGGCTTCTTTCGAATTCCACTTGCCCTCTTTGTAGAGGGACACTCCTTACTCCGGGGTTTTCGATGGAGAATCCAATGTTTGATTTTGATGATATGAGGGAAGATGAAGGGTGGCCTTGTGATGGTGAAAATGGATTTACAAATAGGCAGAAGAAAGCTGTGGTTGAAGAAATCAATGATGAGAAAAGGGGAATTTTCCCCGTAAGGCTCGGTAAATTCCGGAAGATGGATGTGGAGACTGGTGAGGAGGGTGTAGTAGTAGGAGAGACAAGTAGCAGTAATTTGGATGCAAGAAGGTGTTTTTCAATGGGATCTTATCAGTATGTTGTGGCCAATTCAGAACTCAGGATAGCCTTGAATCATGACCGGAGTGATCACAAATTGAGGCTTGCTGCTGAAGGAAAACAACATTCTGAGAAGGCTGCTTTGGAAGGGGATATGGATGCAAAGAATATTAGGAGTGTGAGTAAAGGTGAGAGCTTTTCAGTGTCCAAAATCTGGTTGTGGCCAAAGAAGGGAAAGTTTTCAAGTTCTTCCGAGGCTCATATTGGCATGCCTTCTTATCTTAATTCAGACATGCCTAGGATGAGGGAAGCCGAAGCAGCATGA 1056 0.4309 MHQNWIFEHTHLKMAWIHHHIQQKDGYLSYYYPPPPPLPPLLPPPYLSTPSTSSSASSSSSSSSPSSGTRISPAVLFIIVILAVLFFISGVLHLLVRFLMKHPVFQYKEIVGLKEPFDCAVCLCEFSEKDNLRLLPMCSHAFHISCIDTWLLSNSTCPLCRGTLLTPGFSMENPMFDFDDMREDEGWPCDGENGFTNRQKKAVVEEINDEKRGIFPVRLGKFRKMDVETGEEGVVVGETSSSNLDARRCFSMGSYQYVVANSELRIALNHDRSDHKLRLAAEGKQHSEKAALEGDMDAKNIRSVSKGESFSVSKIWLWPKKGKFSSSSEAHIGMPSYLNSDMPRMREAEAA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03772 351 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 166 IPR013083 -
Arst5g03772 351 CDD RING-H2_EL5-like 118 161 - -
Arst5g03772 351 SMART ring_2 119 160 IPR001841 -
Arst5g03772 351 MobiDBLite consensus disorder prediction 47 68 - -
Arst5g03772 351 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Arst5g03772 351 SUPERFAMILY RING/U-box 99 167 - -
Arst5g03772 351 Pfam Ring finger domain 118 161 IPR001841 -
Arst5g03772 351 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 66 102 - -
Arst5g03772 351 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03772 Arst-Chr5 98267480 98269605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03772 82 328 C3H Transcription Factor Family AT2G18650 40.217 3.47e-42 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03772 - - adu:107490806 612.068