Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03755 ATGGAATCTGGTGGGAGGCTTTTCTTTGATCCATCTGCTTGTAGGGGGAACAACAACATGCTCTTCCTTGGCACTACTGCTGATCTCGCTTTTCGAGGAAGGTCGATCCTGAGCATGGATGAAAGCTCAAAGAGGCGACCTTTCTTCAGCTCACCGGATGATCTGTTTGATGATGAGTACTATGAGGAGCAGCTTCCAGAAAAGAAGCGCCGCCTCACTTCCGAACAGGTCAATCTGTTGGAGAAAAGCTTCGAGGAAGAGAACAAGCTGGAGCCAGAGAGGAAAACCCAGCTGGCGAAGAAGCTGGGGTTGCAGCCGAGGCAGGTGGCAGTGTGGTTCCAGAACCGCAGGGCTCGGTGGAAGACCAAGCAACTTGAAAGGGATTATGATGTTCTCAAGGCTTCCTATGATTCCCTACTTTCAACATATGATTCCATTGTGAAGGAGAATGAAAAGCTCAAATCTGAGGTGGTATCCTTGAATGAAAAGCTTCAATTGCAAGCTAAAGATATGCCAGGGGAGCCGATATCGGACAACAAAGCCGAACCGCTTCCAGTTGAGATAGCTCAAATCATCAGCATGAAAGTTGAGGATCGGCTGAGCACTGGGAGTGTTGGAAGCGCCGTGGTTGATGAGGGTAGTAGTCCACAGCTTGTTGTTGAGAGTGTTGATTCATACTTGAACCAAGAAGAAGGGGAGGTATTGCGTTGGTGGGGTAATATTATGTTGAATAATGCAGCAGTGCTTTTCTAA 753 0.4794 MESGGRLFFDPSACRGNNNMLFLGTTADLAFRGRSILSMDESSKRRPFFSSPDDLFDDEYYEEQLPEKKRRLTSEQVNLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDSLLSTYDSIVKENEKLKSEVVSLNEKLQLQAKDMPGEPISDNKAEPLPVEIAQIISMKVEDRLSTGSVGSAVVDEGSSPQLVVESVDSYLNQEEGEVLRWWGNIMLNNAAVLF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03755 250 SUPERFAMILY Homeodomain-like 57 125 IPR009057 -
Arst5g03755 250 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 60 190 IPR045224 GO:0003700
Arst5g03755 250 CDD homeodomain 68 124 IPR001356 GO:0003677
Arst5g03755 250 Pfam Homeobox associated leucine zipper 123 165 IPR003106 GO:0006355|GO:0043565
Arst5g03755 250 ProSiteProfiles 'Homeobox' domain profile. 63 123 IPR001356 GO:0003677
Arst5g03755 250 Pfam Homeodomain 68 121 IPR001356 GO:0003677
Arst5g03755 250 Gene3D - 61 130 - -
Arst5g03755 250 FunFam Homeobox-leucine zipper protein HAT5 61 125 - -
Arst5g03755 250 Coils Coil 143 170 - -
Arst5g03755 250 PRINTS Lambda-repressor HTH signature 94 103 IPR000047 GO:0003677
Arst5g03755 250 PRINTS Lambda-repressor HTH signature 103 119 IPR000047 GO:0003677
Arst5g03755 250 SMART HOX_1 66 127 IPR001356 GO:0003677
Arst5g03755 250 ProSitePatterns 'Homeobox' domain signature. 98 121 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03755 Arst-Chr5 98010705 98013437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03755 1 227 Homeobox Transcription Factor Family AT3G01470 65.086 1.57e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst5g03755 Homeodomain 5.1e-18 CL0123