Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03727 ATGGCAAGCACACCTAGCATTCCATCTCACATGAAAGCTTGGACCTACTCTGAATATGGTAACATTGAAGACATTCTCAAGTTTGATCCTAATGTCCCTGTACCAGAACTCAATGATGATCAGGTTCTCATTAAGGTTGTGGCTGCAGCTCTTAACCCTGTTGATTATAAGAGGGCCCTTGGAAATTTCAAGAACTCCGACTCTCCTTTGCCGACTTCCCCTGGCTATGACGTTGCGGGTGTGGTAGTGAAAGTGGGAAGCAAAGTGAAGAAGTTCAAAGTTGGAGATGAAGTGTATGGCGACATCAATGAGAATGCATTGAAGAACCCAAAGGCCATAGGGTCACTAGCAGAGTATACTGCAGCTGAAGAGAAAGTGTTGGCTCACAAACCCTTCAATTTGACCTTTGTTGAAGCCTCTAGCCTCCCTTTGGCAATCATCACTGCCTACCAAGGACTTGAAAGAGCTTCTCTTTCTTCCCAAAAATCTATCCTTGTTCTTGGAGGTGCTGGTGGAGTTGGAACTCATGTTGTTCAGCTTAGCAAGCATGTGTTTGGAGCATCAAAGATAGCAGCCACAGCCAGCAGTGGCAAATTGGAACTGTTGAGAAATTTGGGAGCAGACTTGCTTATTGACTATACCAAGGTCAATTTTGAAGATCTTCCAGAAAAGTTTGATGTAGTGTTCGATGCAGTTGGTCAAAATGAGAGGGCATTGAAAGCTATCAAAGAAGGGGGTAAAGTTGTGACAATAGTAGAACCTGAAATTCCTCCTGCTATTTGGTACTTACTCAATTCAGAAGGTGTTGTGTTGGAGAAATTAAAACCTTACTTGGAGAGTGGGAAGATCAAGCCAATAGTGGATCCTAAAAGTCCTTTTCCATTTTCTAATGTCGTTGAAGCATTTGCCTACTTGAAGACTCATAGAGCCACCGGCAAAATAGTCATACACCCCATCCCATGA 963 0.433 MASTPSIPSHMKAWTYSEYGNIEDILKFDPNVPVPELNDDQVLIKVVAAALNPVDYKRALGNFKNSDSPLPTSPGYDVAGVVVKVGSKVKKFKVGDEVYGDINENALKNPKAIGSLAEYTAAEEKVLAHKPFNLTFVEASSLPLAIITAYQGLERASLSSQKSILVLGGAGGVGTHVVQLSKHVFGASKIAATASSGKLELLRNLGADLLIDYTKVNFEDLPEKFDVVFDAVGQNERALKAIKEGGKVVTIVEPEIPPAIWYLLNSEGVVLEKLKPYLESGKIKPIVDPKSPFPFSNVVEAFAYLKTHRATGKIVIHPIP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03727 320 Gene3D - 18 316 - -
Arst5g03727 320 SMART PKS_ER_names_mod 20 316 IPR020843 GO:0016491
Arst5g03727 320 Gene3D - 153 267 - -
Arst5g03727 320 CDD MDR_like_2 11 316 - -
Arst5g03727 320 SUPERFAMILY GroES-like 8 166 IPR011032 -
Arst5g03727 320 Pfam Alcohol dehydrogenase GroES-like domain 40 103 IPR013154 -
Arst5g03727 320 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 320 IPR044626 GO:0016628
Arst5g03727 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 259 IPR036291 -
Arst5g03727 320 Pfam Zinc-binding dehydrogenase 205 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03727 Arst-Chr5 97697820 97699897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03727 36 257 Monolignol Biosynthesis Gene Families AT4G37990 25.794 5.25e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03727 K18980 - gmx:100791274 489.96