LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g03726	ATGGCAGCAAGCACAGCCAGCATTCCATCTCACATAAAAGCTTGGGTCTACAATGAATATGGAAACATTGAAGAGACTCTTAAGCTTGACTCAAACATAGCTTTACCACAACTCAAGGATGATCAGGTTCTCATCAAGGTTGTGGCTGCAGCCCTTAACCCTGTTGATTATAAGAGGGCCCTTGGATTTTTCAAGGACTCTGACTCTCCATTCCCAACTGCTCCAGGGTATGATGTGGCTGGTGTGGTGGTGAAAGTGGGAAGCGAAGTGAAGAAATTCAAGGTTGGAGATGAAGTTTATGGTGATATAAATGAATATGCTGTGAATAATCCAAAAGCTATTGGGTCAGTGGCAGAGTATACTAGTGCTGAAGAGAAAGTGTTGGCTCACAAACCCTCTAATTTGAGCTTTATTGAAGCTGCTAGCCTCCCTGCAGCAATCATCACTGCTTATCAAGGTCTTGAGAGAGTTGAATTTTTTGCTGGAAAATCTATACTTGTTCTTGGAGGTGCTGGTGGAGTTGGAAGTCTTGTTACCCAGCTAGCCAAGCAAGTTTTCGGTGCAGCTAAGGTAGCAGCTACCGCTAGTACCGGGAAACTGGAGCTGTTAAGGAAGTTAGGAGTAGACTTGCCAATTGATTATACAAAGGAGAATTTTGAGGAGCTGCCACAAAAGTTTGATGTTGTGTATGATACAGTAGGACAAACTGACAAGGCATTGAAGGCAATTAAAGAAGGGGGAAAAGTAATAACAATAGCAGGACCTGCAAGTCCACCTGCAATATGGTTCTTTCTCCATTCAGATGGTGCAGTCTTGGACAAACTCAAACCTTATTTAGACAGTGGCAAGGTGAAGCCGGTGTTGGATCCAAAGAGCCCTCTCCCTTTTTCTAAGGCAATAGAAGCATTTTCCTACCTCAAGACCAATAGAGCCACCGGAAAAGTAGTTATACATCCAATCCCATAA	966	0.4337	MAASTASIPSHIKAWVYNEYGNIEETLKLDSNIALPQLKDDQVLIKVVAAALNPVDYKRALGFFKDSDSPFPTAPGYDVAGVVVKVGSEVKKFKVGDEVYGDINEYAVNNPKAIGSVAEYTSAEEKVLAHKPSNLSFIEAASLPAAIITAYQGLERVEFFAGKSILVLGGAGGVGSLVTQLAKQVFGAAKVAATASTGKLELLRKLGVDLPIDYTKENFEELPQKFDVVYDTVGQTDKALKAIKEGGKVITIAGPASPPAIWFFLHSDGAVLDKLKPYLDSGKVKPVLDPKSPLPFSKAIEAFSYLKTNRATGKVVIHPIP	321

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g03726	321	SMART	PKS_ER_names_mod	21	317	IPR020843	GO:0016491
	Arst5g03726	321	CDD	MDR_like_2	13	317	-	-
	Arst5g03726	321	ProSitePatterns	Quinone oxidoreductase / zeta-crystallin signature.	162	183	IPR002364	GO:0008270\|GO:0016491
	Arst5g03726	321	PANTHER	NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC	2	321	IPR044626	GO:0016628
	Arst5g03726	321	Gene3D	-	19	317	-	-
	Arst5g03726	321	SUPERFAMILY	GroES-like	9	169	IPR011032	-
	Arst5g03726	321	Pfam	Alcohol dehydrogenase GroES-like domain	41	102	IPR013154	-
	Arst5g03726	321	Gene3D	-	154	268	-	-
	Arst5g03726	321	Pfam	Zinc-binding dehydrogenase	206	317	-	-
	Arst5g03726	321	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	135	287	IPR036291	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g03726	Arst-Chr5	97681147	97693997	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst5g03726	69	258	Monolignol Biosynthesis Gene Families	AT4G37980	25.000	1.96e-06	47.0

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g03726	K18980		-	gmx:100791274	506.523

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