Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03711 ATGATGAATGGAAAAGCCTCCGTCTCTAAGGAACTTAATGCCAAACACATCAAGGTTTTAGAGGGACTTCTTAGGCTACCTGACAACAGGGAATGTGCAGATTGCCGGAATAAGGCACCACGATGGGCAAGTGTGAACCTAGGAATTTTCATTTGCATGCAGTGTTCAGGAATTCACCGAAGTCTTGGAGTACACATATCACAGGTGCGGTCTACAACTTTGGATACATGGTTGCCAGAACAAGTATCTTTCATGCAACTTATGGGTAATGTGAATGCCAATAAGCACTGGGAGGCTGAGCTGCCGACAAATGTTGACAGAAATCGATATGGAATCGACAAATTTATTCGCGCCAAGTATGTGGATAAAAAATGGGCTTCAAAACATGGTCTACAAGCAGCATCTGCAAAGTCATCTGAAACATTGAGGAATCATCAAAGGAATAGAAGATTGTCTCTTGAGGAAAGCATTCTTGTGGGCCACATGGCACAAATTCAGCCGCCACAGCCGCAAGTAGCAAAATCTCATGAGATCCCCTCAGGTTTGGAAAGAAAGAAAAGTGCACCACAAGTAAAGATCCGGGGGCCATCGGCATCACTTGATTTTGATAATCTCACAAGAAATGGAAACAGTACTACCGTTGATCTTTTTGCCTTTCTTAATTTCAATGATAATAATAATAATAATAATAATAATAATAATAATAATAAGAGATTACATTATTTGTATCGCCAATCCATTACCCTATTTCTCCCTGAATCGCTGGCACCCCACCTTCGAGTCCCACCTCCTGAACGCTCCCACCAGATCGGTGAATGGTTCCGATGTAACGGCGGTGGGAGTGAATTGAGCGCTTCTACTGGTAGTGGTGGTGGTGATGGGGGAGAGGGAGGAGGGGAAGTGGAAGAAGCCGGAGAAGAAGAGAAGAAAATGAAGAGGAGCATGATGGAGATGGTGATGGTGATGTTGATGGGTTTGGGTGGCACCAGCAGCATGGTGTTAATGTGGTTACATCTCTGCGTCGTCTCTGCCGTCGGGAAGTAG 1044 0.4444 MMNGKASVSKELNAKHIKVLEGLLRLPDNRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISQVRSTTLDTWLPEQVSFMQLMGNVNANKHWEAELPTNVDRNRYGIDKFIRAKYVDKKWASKHGLQAASAKSSETLRNHQRNRRLSLEESILVGHMAQIQPPQPQVAKSHEIPSGLERKKSAPQVKIRGPSASLDFDNLTRNGNSTTVDLFAFLNFNDNNNNNNNNNNNNKRLHYLYRQSITLFLPESLAPHLRVPPPERSHQIGEWFRCNGGGSELSASTGSGGGDGGEGGGEVEEAGEEEKKMKRSMMEMVMVMLMGLGGTSSMVLMWLHLCVVSAVGK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03711 347 CDD ArfGap 20 120 - -
Arst5g03711 347 Gene3D Arf GTPase activating protein 2 133 IPR038508 -
Arst5g03711 347 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 133 IPR001164 GO:0005096
Arst5g03711 347 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 2 184 IPR044520 GO:0005096
Arst5g03711 347 MobiDBLite consensus disorder prediction 167 191 - -
Arst5g03711 347 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Arst5g03711 347 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Arst5g03711 347 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Arst5g03711 347 MobiDBLite consensus disorder prediction 283 310 - -
Arst5g03711 347 SUPERFAMILY ArfGap/RecO-like zinc finger 18 127 IPR037278 -
Arst5g03711 347 FunFam stromal membrane-associated protein 1 isoform X1 2 131 - -
Arst5g03711 347 SMART arf_gap_3 18 133 IPR001164 GO:0005096
Arst5g03711 347 Pfam Putative GTPase activating protein for Arf 19 128 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03711 Arst-Chr5 97408485 97413759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03711 20 139 C2H2 Transcription Factor Family AT4G05330 46.825 2.61e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03711 K12486 - gmx:100802691 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03711 5 97408485 97413759 Arst5g03711 5 97408485 97413759 ECH
Arst5g03711 5 97408485 97413759 Arst5g03711 5 97408485 97413759 PCT