Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03708 ATGATTTGTCTTTCACATTTATTTATGTGGCTAGCAATTGTGTTCATGTTATTGGCCAACAATTGCTCTGAGATGGCCGATGCACACGAGACTGACAAGAACATTGAGATTTGGAAGATCAAGAAATTGATCAAAGCTCTCGAGGCTGCTAGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCCCCACGAGATCAAATATCTCGAGTTACCAAGATGCTTGGTGATGAGTTTGGTACTGCTTCCAACATCAAGAGCAGGGTGAACCGGCAGTCTGTGCTTGGGGCCATCACCTCTGCCCAGCAGAGGCTCAAGCTCTATAACAAGGTTCCTCCAAACGGGCTTGTGCTGTATACTGGCACGATTGTTACTGAAGATGGGAAGGAAAAGAAGGTTACTATTGATTTTGAGCCTTTCAGACCTATCAATGCTTCCCTCTATCTGTGTGACAACAAGTTTCATACTGAGGCTCTAAATGAGCTTTTGGAGTCAGATGACAAGTTTGGGTTCATTGTCATGGATGGCAATGGTACCCTGTTTGGGACCTTGAGTGGTAACACAAGGGAAGTGCTTCATAAATTCAGTGTCGATCTCCCAAAGAAGCACGGAAGAGGAGGGCAATCAGCTCTTCGATTTGCCCGTCTTCGCATGGAGAAACGTCATAACTATGTCAGGAAGACTGCAGAGCTTGCAACTCAGTTTTATATCAATCCAGCTACCAGCCAGCCAAATGTTTCTGGATTAATACTTGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCTGATATGTTTGATCCTCGACTCCAAGCAAAAATTCTCAATGTTGTAGATGTTTCCTATGGTGGTGAAAATGGGTTTAATCAGGCTATTGAACTTTCATCTGAGATTCTGTCCAATGTGAAATTTATCCAGGAGAAACGCTTGATTGGAAAATATTTTGAGGAAATTAGCCAGGATACTGGGAAATATGTTTTTGGGGTTGAGGATACTTTGAAAGCTTTGGAGATGGGAGCTGTTGAGACACTCATTGTGTGGGAAAATTTGGATATGAGTAGGTTTGTCTTGAAAAACAGTGCTACTGGTGAGGTTGTCATTCAACACTTCAACAAGGAACAAGAGGCCAATCAGAGCAACTTCCGGGATCCTGTATCCAATGCTGATTATGAGGTGCAGGAAAAAATCTCTCTTTTGGAGTGGTTTGCAAATGAATACAGGCGGTTTGGTTGCACTCTTGAGTTTGTCACAAATAAGTCGCAAGAAGGGTCACAATTTTGTAGAGGTTTTGGTGGGATTGGTGGTATCTTGCGCTACCAGCTGGACATGAGGACATTTGATGATTTCTCTGAAGATGATGCTGTCTATGAATCTGAATAG 1383 0.4281 MICLSHLFMWLAIVFMLLANNCSEMADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVEDTLKALEMGAVETLIVWENLDMSRFVLKNSATGEVVIQHFNKEQEANQSNFRDPVSNADYEVQEKISLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSEDDAVYESE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03708 460 Pfam eRF1 domain 3 305 442 IPR005142 -
Arst5g03708 460 Gene3D eRF1 domain 2 160 301 IPR042226 -
Arst5g03708 460 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 30 164 IPR024049 -
Arst5g03708 460 SUPERFAMILY Translational machinery components 166 300 - -
Arst5g03708 460 FunFam Eukaryotic peptide chain release factor subunit 1 26 159 - -
Arst5g03708 460 FunFam Eukaryotic peptide chain release factor subunit 1 160 301 - -
Arst5g03708 460 SUPERFAMILY L30e-like 302 444 IPR029064 -
Arst5g03708 460 Pfam eRF1 domain 2 168 301 IPR005141 -
Arst5g03708 460 Gene3D - 303 460 IPR029064 -
Arst5g03708 460 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 27 453 IPR004403 GO:0003747|GO:0006415
Arst5g03708 460 NCBIfam peptide chain release factor aRF-1 36 441 IPR004403 GO:0003747|GO:0006415
Arst5g03708 460 Gene3D eRF1 domain 1 21 159 IPR024049 -
Arst5g03708 460 SMART eRF1_1_2 28 164 IPR005140 -
Arst5g03708 460 Pfam eRF1 domain 1 42 162 IPR005140 -
Arst5g03708 460 FunFam Peptide chain release factor subunit 1 303 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03708 Arst-Chr5 97366458 97369713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03708 25 458 Eukaryotic Initiation Factors Gene Family AT3G26618 89.631 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03708 K03265 - gmx:100785916 816.994