Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03692 ATGGTTCGGAAGAAGAGAACTGAAGCAGCTAGTTCTAGTGGGGGTGAAAGCTCTGAGGGCCAACAGCGCCCTGCAGAAAGGAGTGCTCCACCCCAACAGGCTGCTCCCACCAGTGGGCCTGGGCCACAAGGGGGAGGTAGGAGTTGGGGTCCCCAAGGAGGACGTGGTGGTTATGGAGGAGGACGTGGCCGTGGAATGCCTCAACAGCAGTATGGTGGCCCCCCTGAGTATCAAGGTAGGGGACGGGGAGGACCTCCCCAGCAAGGGTATGCTCCACGAGGTGGATATGGTGGTGGCCGCGGTGGTGGTGGTGGTGGTGTAGGAGGCGGTCGAGGCGTAGGACCTTCTTATGGTGGCCCACCACGGCCCCAAGTTCCCGAGCTGCACCAAGCTACCCCCCCAGTTCAGTATCAAGCGGCTGTGTCTCCTCGGCCTCCTCCCTCTGAGGCTAGTTCCAGTTCATCCCAGCCACAGGAGATGCCCCAACTGGAACAGCAAATGGGGCATATAACTCAGACAGAAGCTGCCCCTTCTGGTCCACCAGCTAGCAAGTCATCCATGAGGTTTCCCCTTCGCCCTGGGAAGGGTAGCTACGGCACAAAATGTATTGTCAAGGCCAACCATTTCTTTGCTGAGCTGCCAAACAAAGATCTGCATCAGTATGATGTAACGATCACTCCAGAAGTTACATCAAGAGGCGTTAACCGTGCTGTTATGGAGGAGTTGGTGAGGCTTTACCGAGAATCCCATTTGGGGAAGAGACTTCCTGCTTATGATGGGCGAAAGAGCCTCTATACAGCTGGTCCACTGCCTTTCGTGTCAAAGGAGTTTAGGATCATGTTAATTGATGAAGATGATGGAACTGGAGCTCAAAGGAGGGAGAGAGAATTCAAAGTTGTGATAAAATTGGCTGCTCGGGCAGACCTTCACCATTTAGGGCTCTTTTTGCAAGGGAGACAAACTGATGCACCTCAGGAAGCATTGCAGGTTCTCGATATTGTGTTGCGTGAACTTCCTACTACCAGGTATTCTCCTGTAGGAAGATCATTTTATTCACCCGATCTTGGAAGAAGACAGCCTTTGGGTGAGGGGTTAGAAAGCTGGCGTGGTTTCTATCAGAGTATTCGTCCCACACAGATGGGACTTTCTCTGAACATTGATATGTCTTCCACTGCATTTATTGAGCCATTGCCGGTGATTGAGTTTGTAACTCAGCTACTGAATAGGGATGTATCCACCCGACCACTGTCAGATGCTGATCGTGTGAAGATCAAAAAAGCTCTCCGTGGTATCAAGGTTGAAGTAACTCATCGTGGAAACATGAGAAGAAAATATCGCATCTCTGGTCTGACTTCCCAGGCTACTAGAGAGTTGACATTCCCTGTAGACGAGAGGGGAACAATGAAGTCTGTTGTCGAGTACTTCTCTGAGACCTACGGGTTTCACATTCAACATACTCAGTGGCCTTGTTTGCAAGTGGGAAATACACAGAGGCCAAATTATCTGCCAATGGAGGTTTGCAAGATTGTAGAAGGGCAGAGGTACTCAAAGAGGTTGAATGAAAGGCAGATTACTGCTTTGCTCAAAGTCACATGCCAACGACCTGTTGAAAGGGAGCGTGACATAATGCAGACAGTACATCACAATGCCTATGATCAAGACCCTTACGCTAAAGAGTTTGGAATCAAGATCAGTGAAAAGCTTGCTCAAGTTGAAGCTCGCATCCTTCCTCCACCCTGGCTCAAATATCATGATACAGGTAGAGAAAAGGACTGCCTACCTCAGGTTGGCCAGTGGAATATGATGAATAAGAAAATGGTTAATGGAGGAACAGTCAACCATTGGTTCTGCATTAACTTTTCCAGGAATGTTCAAGATAGTGTTGCCCGTACATTTTGTTACGAGCTCGCTCAGATGTGTCAAGTATCTGGCATGGCATTCAATCTGGATCCAGTAGTTCCCCCAGTTAGTGCTCGTCCTGACCAAGTTGAGAAGGTTCTGAAAACTCGGTATTATGATGCCAAGAACAAGCTGCCTGGAAAGGATCTTGATTTGCTTATTGTTATCCTGCCTGACAATAATGGTTCTCTTTATGGTGACCTGAAACGAATATGTGAGACTGATCTTGGGCTTGTTTCCCAATGTTGTTTAACAAAGCATGTATACAAAATGAGCAAGCAGTATCTTGCAAATGTTGCTTTGAAAATTAATGTTAAGGTTGGTGGAAGGAACACTGTGCTTGTTGACGCCCTTTCGCGGCGTATTCCCCTTGTTAGTGACAGGCCTACAATAATTTTTGGAGCCGATGTTACTCACCCACACCCTGGAGAGGATTCAAGCCCATCTATTGCAGCTGTTGTGGCTTCCCAAGATTGGCCTGAGATTACAAAGTATGCTGGTTTGGTTTGTGCACAAGCACATCTGATGGAACTACTCATATCTTTCCGGAGAGCAACTGGGCAGAAGCCACAGCGCATCATATTTTACAGGGATGGTGTGAGTGAGGGTCAATTTTATCAAGTCCTATTGTTTGAGCTTGATGCTATTAGAAAGGCCTGTGCATCTCTTGAGCCCAATTATCAGCCTCCTGTGACCTTTGTGGTAGTTCAAAAGCGTCATCACACTAGGCTTTTTGCCAGCAACCATCATGATCGAAACTCTATTGATCGGAGTGGGAATATACTGCCCGGTACTGTTGTGGACTCCAAAATCTGCCACCCAACTGAATTTGACTTTTATCTCTGTAGTCATGCTGGAATTCAGGGCACTAGTCGTCCAGCTCATTATCACGTTCTGTGGGATGAAAACAATTTCACAGCTGATGCTCTTCAGATGCTTACAAACAACCTGTGCTACACCTATGCCAGATGCACCCGTTCTGTTTCAATTGTGCCTCCTGCATACTATGCGCACTTGGCTGCATTCCGAGCCCGTTTTTACATGGAGCCCGAGACATCCGACAGTGGCTCGATGACAAGTGGTGCTGCTGCAGGTCGCGGTATGGGTGCAGGACGCAGTACGCGTGCACCTGGTGCCAGTGCTGCTGTGAGGCCCCTGCCATCCCTCAAGGACAATGTCAAGAGGGTCATGTTCTATTGCTGA 3102 0.4855 MVRKKRTEAASSSGGESSEGQQRPAERSAPPQQAAPTSGPGPQGGGRSWGPQGGRGGYGGGRGRGMPQQQYGGPPEYQGRGRGGPPQQGYAPRGGYGGGRGGGGGGVGGGRGVGPSYGGPPRPQVPELHQATPPVQYQAAVSPRPPPSEASSSSSQPQEMPQLEQQMGHITQTEAAPSGPPASKSSMRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEELVRLYRESHLGKRLPAYDGRKSLYTAGPLPFVSKEFRIMLIDEDDGTGAQRREREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTTRYSPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVTQLLNRDVSTRPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFSETYGFHIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYDQDPYAKEFGIKISEKLAQVEARILPPPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWFCINFSRNVQDSVARTFCYELAQMCQVSGMAFNLDPVVPPVSARPDQVEKVLKTRYYDAKNKLPGKDLDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHLMELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDRNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAAAGRGMGAGRSTRAPGASAAVRPLPSLKDNVKRVMFYC 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03692 1033 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 174 983 - -
Arst5g03692 1033 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 174 983 - -
Arst5g03692 1033 SMART DUF1785_2 344 396 IPR014811 -
Arst5g03692 1033 ProSiteProfiles PAZ domain profile. 397 511 IPR003100 GO:0005515
Arst5g03692 1033 MobiDBLite consensus disorder prediction 1 192 - -
Arst5g03692 1033 CDD Piwi_ago-like 555 981 IPR045246 -
Arst5g03692 1033 SUPERFAMILY PAZ domain 203 548 IPR036085 GO:0005515
Arst5g03692 1033 SMART Piwi_a_2 685 982 IPR003165 GO:0003676
Arst5g03692 1033 SMART PAZ_2_a_3 401 533 IPR003100 GO:0005515
Arst5g03692 1033 CDD PAZ_argonaute_like 396 510 - -
Arst5g03692 1033 FunFam Protein argonaute-2 390 516 - -
Arst5g03692 1033 MobiDBLite consensus disorder prediction 990 1015 - -
Arst5g03692 1033 Pfam Argonaute linker 2 domain 537 583 IPR032472 -
Arst5g03692 1033 Pfam Argonaute linker 1 domain 345 395 IPR014811 -
Arst5g03692 1033 MobiDBLite consensus disorder prediction 11 34 - -
Arst5g03692 1033 FunFam Argonaute 10 575 748 - -
Arst5g03692 1033 Gene3D - 575 748 - -
Arst5g03692 1033 Pfam Glycine-rich region of argonaut 72 176 IPR024357 -
Arst5g03692 1033 Pfam Piwi domain 686 981 IPR003165 GO:0003676
Arst5g03692 1033 Gene3D paz domain 390 515 - -
Arst5g03692 1033 FunFam protein argonaute 10-like 808 1033 - -
Arst5g03692 1033 Pfam PAZ domain 401 526 IPR003100 GO:0005515
Arst5g03692 1033 Pfam N-terminal domain of argonaute 201 335 IPR032474 -
Arst5g03692 1033 SUPERFAMILY Ribonuclease H-like 671 982 IPR012337 -
Arst5g03692 1033 ProSiteProfiles Piwi domain profile. 685 982 IPR003165 GO:0003676
Arst5g03692 1033 MobiDBLite consensus disorder prediction 145 180 - -
Arst5g03692 1033 Gene3D - 754 1033 IPR036397 GO:0003676
Arst5g03692 1033 Pfam Mid domain of argonaute 594 669 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03692 Arst-Chr5 97069417 97076407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03692 76 1033 Eukaryotic Initiation Factors Gene Family AT1G48410 78.831 0.0 1558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03692 K11593 - gmx:100780375 1660.58