Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03691 ATGTCACCAGTTGGATTACCACCTGGGTTTAGGTTTCATCCAACAGATGAAGAGCTTGTTAACTATTATCTAAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAAAAATCATTTTTGCCGAGTAGAGATCCAGAGTGGTATTTCTTTGGACCAAGGGACAGAAAATACCCTAACGGATTCAGAACAAATAGAGCAACACGAGCAGGGTACTGGAAATCAACAGGTAAAGACAGGAGAGTTTCAAGCCAAAGCAGACCAATTGGTATGAAGAAGACTTTGGTTTATTATAGAGGAAGGGCTCCTCAGGGAATCAGAACTGATTGGGTTATGCACGAATATCGTCTAGATGACAAGGACTCTGAAGACACCACCGGTTTACAGGATACTTATGCTTTGTGCCGTGTGTTCAAGAAAAATGGAATATGTACGGATGTTGAAGAGCAAGTAGGGCATTGTAGTAACATGTCTTCACTAATTGAGAGCTCACAAACCATAATCAATAATAATAACAATAATAGTAATAATAATAATGAGTATTGTGAAACCATGTCACCAGACATAGCAGGGGTTTCATCTTCATGTTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATCACAGAAGATGCATGGTACTCTTCTAATGCACCAAATATGGTTGGTGGTGAAGAAGTTTCACATGTTACATTTACAAGCTAA 759 0.39 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSSQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDSEDTTGLQDTYALCRVFKKNGICTDVEEQVGHCSNMSSLIESSQTIINNNNNNSNNNNEYCETMSPDIAGVSSSCLEEEDKDDSWMQFITEDAWYSSNAPNMVGGEEVSHVTFTS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03691 252 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 194 - -
Arst5g03691 252 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Arst5g03691 252 FunFam Nac domain-containing protein 86 15 159 - -
Arst5g03691 252 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Arst5g03691 252 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Arst5g03691 252 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03691 Arst-Chr5 96947613 96952222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03691 1 245 NAC Transcription Factor Family AT3G17730 76.984 1.79e-133 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst5g03691 NAM 6.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03691 - - ahf:112750829 518.464