Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03689 ATGGCTAATATTGCTAACAGCATCGTCTTTGGGGGTGTTGTTGGGGTTGCAGCACAACTTCCTCAATCTCCGTTTCCATCATTACCCGTTTCAAATTCTCCCATTTTCACCCAAAAACGCAAACTTTATCTTAATTGCTCCAAAACCAACCGCATAACAATCCCTTTCCCTTCTTCTTCTTCTTCTTCTTCATCACCGTTCAGCAGCAAGTGTTGTTGCTATGTGTTGGCGTGTCTCCCTCAACCACATGCTTCTGATTCATCATCATCATCAACTTCTTCTAATTCCAATAGCAAACCAAGTTCTTCTTCTGCTGCTCCTCCTTCAACTAAGCTCTATGTTAGTGGGTTATCTTTTCGAACCACTGAAGAAAGCTTGCGAAATGCATTTATGAATTTTGGTCAAGTTTTAGAAGTGAATTTGGTGATGGATAAAATTGCAAATAGACCAAGAGGGTTTGCATTTCTTAGATATGCAACTGAACAGGAATCTCTGAAGGCTATTGAGGGAATGCATGGAAAGTTCTTGGATGGTAGGGTCATATTTGTGGAAGTTGCCAAACCAAGATCAGAACTAAGGCAAAGACAAAACACTAGATACTAG 603 0.4046 MANIANSIVFGGVVGVAAQLPQSPFPSLPVSNSPIFTQKRKLYLNCSKTNRITIPFPSSSSSSSSPFSSKCCCYVLACLPQPHASDSSSSSTSSNSNSKPSSSSAAPPSTKLYVSGLSFRTTEESLRNAFMNFGQVLEVNLVMDKIANRPRGFAFLRYATEQESLKAIEGMHGKFLDGRVIFVEVAKPRSELRQRQNTRY 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03689 200 PANTHER NUCLEOLAR PROTEIN 8 96 196 - -
Arst5g03689 200 MobiDBLite consensus disorder prediction 86 109 - -
Arst5g03689 200 SMART rrm1_1 111 184 IPR000504 GO:0003723
Arst5g03689 200 SUPERFAMILY RNA-binding domain, RBD 99 198 IPR035979 GO:0003676
Arst5g03689 200 Gene3D - 80 200 IPR012677 -
Arst5g03689 200 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 110 188 IPR000504 GO:0003723
Arst5g03689 200 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 112 181 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03689 Arst-Chr5 96908151 96911237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03689 110 200 Eukaryotic Initiation Factors Gene Family AT4G34110 28.571 1.22e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03689 - K13195 ahf:112802436 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03689 5 96908151 96911237 Arst5g03689 5 96908151 96911237 ECH