Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03687 ATGGAGATGCAGGACCAAATCGAAGGCACAAAGCTAAGCAAGTCTGGTACAGCCAGTGACTGCCATTCCAATGATGGATCACAATCCCAATCGCCAGATATAAGTTCTGTTGTGAACAATCATGCCCCCAAGGTGAGGAAACCATATACCATCACTAAGCAAAGGGAGAAGTGGACTGAGGAAGAGCATGAAAAGTTCCTTGAAGCTTTGAAGTTGTATGGTCGGGGATGGCGTCAAATTGAAGAGCATATAGGCACCAAAACTGCTGTTCAGATTCGAAGCCATGCACAAAAGTTTTTCTCTAAGGTTGTGCGGGACTCGGACGGAAGTGCTGAAAGTTCTATACATCCAATTGACATACCTCCTCCTCGTCCTAAAAGGAAACCCCTTCATCCATATCCCCGTAAATTGGCCAACTCCTTCAAAAGGCACTCCATACCAAATGAACCAGAAAAATCTCCATCGCCTAATCTGTCCTCTGCGGAGAAAGACTCTCAATCTCCAACCTCTGTGCTATCTGCCTTTGGTTCGGAAGCATTTGGGTCAGCATTTTCAGAGCAGACCAACAGATGCCTTTCTCCGAATTCTTGCACTACTGACATTCAATCAATCAACTTGTCACCTATTGAGAAGGAAAATGATTGCATGACATCTAAACCATCCAAGGAGGAAGACAAAACGCCTCTAGCTTCTGCCCCTTTATCCATCAGCTCACAACCTTACTTGCACATGTCTGAGAAGTTGGAGTTGTGTTCCAAGCAAACCAAGTGTATCAACAATGATGTTGTCAATGTCCTGCCCACTACTATAAAGCTGTTTGGAAGAACTGTTTCAATGGTCGGTAATCAGGAGTCAATTAATACTGAAGAGGAGTGTGTTAAGCTATGTATTACTAGGTCTGATGAAGTAGATGATGTTGAGAATCAATTGAATACACAGTTATCACTAGGCATGTGTAATGGAAGTTGGCAAGTAATGCCTAAAGAAGCTATAGTGAAGGAGGACCTTGGCCTTGGAGAATCTGCACCTGAAGCATCTTTGTCATGGTCAAGTTGGTTCCCAGGCGGTCCGGCTGCTTACTTTGGTTCATCCAATACAGTCGTAAATCCTATGCCTCTTCACCCCTCCTTGAAAGTAAGAACTAGAGAGGAGGAAGGTTCTTGTACTGGTTCCAATGGTGAATCAGTCAATGATGTGGAAATTCAGGGCAAGATTCAGGGAAGGTTCTTGGACACCGTCGATTCCAGGTGTCAACAAACATCTCATCAAGAGGAAGTAGTAGTCCCCCAGAAGTCTCCAAGGGGTTTTGTACCATACAAAAGATGTTTAGCTGAAAGAGATGCAAGTTCTTTGATTGTTGCATTGGAAGAAAGGAAGGGGCAAAGAGCTAGGGTGTGCTCATAG 1404 0.4423 MEMQDQIEGTKLSKSGTASDCHSNDGSQSQSPDISSVVNNHAPKVRKPYTITKQREKWTEEEHEKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVVRDSDGSAESSIHPIDIPPPRPKRKPLHPYPRKLANSFKRHSIPNEPEKSPSPNLSSAEKDSQSPTSVLSAFGSEAFGSAFSEQTNRCLSPNSCTTDIQSINLSPIEKENDCMTSKPSKEEDKTPLASAPLSISSQPYLHMSEKLELCSKQTKCINNDVVNVLPTTIKLFGRTVSMVGNQESINTEEECVKLCITRSDEVDDVENQLNTQLSLGMCNGSWQVMPKEAIVKEDLGLGESAPEASLSWSSWFPGGPAAYFGSSNTVVNPMPLHPSLKVRTREEEGSCTGSNGESVNDVEIQGKIQGRFLDTVDSRCQQTSHQEEVVVPQKSPRGFVPYKRCLAERDASSLIVALEERKGQRARVCS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03687 467 CDD SANT 57 100 IPR001005 -
Arst5g03687 467 ProSiteProfiles SANT domain profile. 53 104 IPR017884 -
Arst5g03687 467 NCBIfam myb-like DNA-binding domain, SHAQKYF class 53 102 IPR006447 GO:0003677
Arst5g03687 467 Gene3D - 57 104 - -
Arst5g03687 467 MobiDBLite consensus disorder prediction 8 38 - -
Arst5g03687 467 PANTHER SWI/SNF COMPLEX-RELATED 30 247 - -
Arst5g03687 467 MobiDBLite consensus disorder prediction 105 170 - -
Arst5g03687 467 MobiDBLite consensus disorder prediction 208 234 - -
Arst5g03687 467 MobiDBLite consensus disorder prediction 150 170 - -
Arst5g03687 467 FunFam protein REVEILLE 6 isoform X1 57 105 - -
Arst5g03687 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Arst5g03687 467 MobiDBLite consensus disorder prediction 1 60 - -
Arst5g03687 467 SUPERFAMILY Homeodomain-like 49 102 IPR009057 -
Arst5g03687 467 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Arst5g03687 467 SMART sant 54 102 IPR001005 -
Arst5g03687 467 Pfam Myb-like DNA-binding domain 55 98 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03687 Arst-Chr5 96903711 96907798 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst5g03687 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03687 - - gmx:778089 539.265