Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03685 ATGGAGTATGGTAGCGGAGGGAGTGGTGGGTCCCCAGGGGAGCACCACCATCACCACCACAATCACAACGACGCTTCTTCTTCCGAGCGGAGGAAAAAGCGCTACCACCGTCACAGTGCGAATCAGATTGAAAGGCTTGAAAGGGTGTTCAAGGAGTGTAATCACCCAGACGAGAAGCAGAGATTGCAGTTAAGCAGAGAATTAGGCTTGGCTCCAAGGCAGATCAAATTTTGGTTCCAGAACAGAAGGACCCAGATGAAGGCGCATGGAGAGAGAGCAGATAACTGTGCACTGAGGGCAGAGAATGATAAGATACGTTGCGAGAACATAGTCATAAGGGAGGCCCTCAAGAACGTTATCTGCCCCTCTTGTGGTGGTGGCCCCTCCCTCAACGACGATTCCTATTTCGATGAACAAAAATTGAGACTTGAGAATGCCCAACTAAAAGAAGAGCTTGATAGAGTGTCTAGCATTGCGGCTAAGTACATTGGAAGGCCAATTTCACAGCTCCCACCAGTTCAGCCAATTCATATATCCTCCCTTGATTTGACCATGTCGAGTTTTGGGGGCCACGCCGGGTTCGGCGGCGGCCCCTCCCTCGACCTTGACCTCCTTCCGGGGAGTTCCTCGGCTATGCCGCCGCATGTGCCTTACCAGCCGGCTTGTCTCTCGGACATGGACAAGTCTCTAATGTCAGGCATTGCCTCTAACGCCATGGAGGAATTGCTGAGCCTCTTGCAGACCAATGAGCCGTTGTGGATGAAATCAAGTGATGGGAGAGATGTTCTTAATTTTGATGCATATGATAGGATGTTTCCAAAGGCTAATAGTCACTTGAAGAACCCCAATGTTAGGATAGAAGCTTCTAGAGACTCTGGTGTTGTTATCATGAATGGCCTAACCTTGGTTGACATGTTCATGGATCCAAGCAAGTGGATGGAGCTGTTTCCCACAATTGTAACGGCTGCAAGAACAATTGAAGTTATATCTTCTGGGATGATGGGGGGTCATAGTGGTTCTTTGCAATTGATGTATGAAGAGTTGCAAGTGCTGTCTCCACTTGTTTCAACAAGAGAATTCTACTTCCTCCGTTATTGTCAGCAAATTGAGCAAGGTCTATGGGCAATAGTAGATGTTTCCTATGATTTTCCACAGGACAATCACTTTGCTCCGCCGTTCCGATCTCATCGCCTTCCTACCGGTTGCTTCATTCAGGACATGCCTAATGGATACTCCAAGGTTACATGGGTTGAACATGTAGAGATCGAAGACAAAACTCCGGTTCATCGTCTTTTCCGGAATCTTGTTTATAATGGAATGGCATTTGGAGCTCAGAGATGGCTTGCTGTGTTGCAGAGGATGTGTGAAAGATTGGCTTGTTTAATGGTAACAGGAAATTCCACCAGGGACCTTGGAGGAGGTAAGNNNNGCATGATGAGGCTAGCACAAAGAATGGTAACCAATTTTTGCGCGAGCATTGGCACGTCGGCCGGCCACAGGTGGACCACACTGTCCGGGATGAATGAGATTGGTGTCAAGGTCACTGTCCACAAGAGCACAGACCCCGGTCAACCTAGCGGCGTGGTGCTGAGCGCCGCCACCACCATTTGGCTCCCTCTCCCTCCACAAACCGTCTTCAATTTCTTCAAGGACGAAAGAAAAAGACCACAGTGGGATGTTCTTTCTAATGGCAATGTACAAGAAGTTGCTCATATAGCAAATGGTTCACACCCTGGTAACTGTATATCTGTGCTTCGGGCATACAACACAAGCCAGAATAACACACTGATACTACAAGAGAGTTGCATAGATCCATCAGGCTCCATAGTAGTATACTGTCCGGTTGAGCTTCCATCGATCAACATAGCAATGAGCGGCGAGGACCCGTCGTATATCCCCCTGGTACCGTCAGGTTTCACGATCACCCCCGACGGAAACCACCACGATCATCAAGGAGGTGGTGACGGGGCATCCACAAGCTCAACCCCAAGCAGAAGCAGCAGCACCATGGTGGGAATGAGATCCGGCGGGTCACTGGTGACGGTTGCATTCCAAATACTAGTGAGTAGCTTGCCATCTGCAAAGCTCAACATGGAGTCTGTAGCAACTGTTAATAACCTCATCAGCACCACTGTTCAGCAAATTAAAGCTGCTTTGAATTGTCCTACTTCCTGA 2175 0.4869 MEYGSGGSGGSPGEHHHHHHNHNDASSSERRKKRYHRHSANQIERLERVFKECNHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAHGERADNCALRAENDKIRCENIVIREALKNVICPSCGGGPSLNDDSYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLTMSSFGGHAGFGGGPSLDLDLLPGSSSAMPPHVPYQPACLSDMDKSLMSGIASNAMEELLSLLQTNEPLWMKSSDGRDVLNFDAYDRMFPKANSHLKNPNVRIEASRDSGVVIMNGLTLVDMFMDPSKWMELFPTIVTAARTIEVISSGMMGGHSGSLQLMYEELQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYDFPQDNHFAPPFRSHRLPTGCFIQDMPNGYSKVTWVEHVEIEDKTPVHRLFRNLVYNGMAFGAQRWLAVLQRMCERLACLMVTGNSTRDLGGGKXXMMRLAQRMVTNFCASIGTSAGHRWTTLSGMNEIGVKVTVHKSTDPGQPSGVVLSAATTIWLPLPPQTVFNFFKDERKRPQWDVLSNGNVQEVAHIANGSHPGNCISVLRAYNTSQNNTLILQESCIDPSGSIVVYCPVELPSINIAMSGEDPSYIPLVPSGFTITPDGNHHDHQGGGDGASTSSTPSRSSSTMVGMRSGGSLVTVAFQILVSSLPSAKLNMESVATVNNLISTTVQQIKAALNCPTS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03685 724 Gene3D - 15 102 - -
Arst5g03685 724 ProSiteProfiles START domain profile. 224 460 IPR002913 GO:0008289
Arst5g03685 724 ProSiteProfiles 'Homeobox' domain profile. 29 89 IPR001356 GO:0003677
Arst5g03685 724 FunFam Homeobox-leucine zipper protein GLABRA 2 233 456 - -
Arst5g03685 724 MobiDBLite consensus disorder prediction 12 30 - -
Arst5g03685 724 CDD homeodomain 31 87 IPR001356 GO:0003677
Arst5g03685 724 SMART HOX_1 30 93 IPR001356 GO:0003677
Arst5g03685 724 MobiDBLite consensus disorder prediction 1 41 - -
Arst5g03685 724 MobiDBLite consensus disorder prediction 653 673 - -
Arst5g03685 724 ProSitePatterns 'Homeobox' domain signature. 64 87 IPR017970 GO:0000981|GO:0006355
Arst5g03685 724 CDD START_ArGLABRA2_like 228 456 - -
Arst5g03685 724 Pfam Homeodomain 32 87 IPR001356 GO:0003677
Arst5g03685 724 FunFam Homeobox-leucine zipper protein HDG1 18 105 - -
Arst5g03685 724 MobiDBLite consensus disorder prediction 642 673 - -
Arst5g03685 724 SUPERFAMILY Bet v1-like 225 458 - -
Arst5g03685 724 Gene3D - 232 457 IPR023393 -
Arst5g03685 724 Coils Coil 138 158 - -
Arst5g03685 724 Pfam START domain 235 457 IPR002913 GO:0008289
Arst5g03685 724 SUPERFAMILY Homeodomain-like 12 88 IPR009057 -
Arst5g03685 724 SUPERFAMILY Bet v1-like 474 716 - -
Arst5g03685 724 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 30 720 IPR042160 -
Arst5g03685 724 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 30 720 IPR042160 -
Arst5g03685 724 SMART START_1 233 457 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03685 Arst-Chr5 96786407 96790521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03685 28 724 Homeobox Transcription Factor Family AT1G73360 63.418 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst5g03685 START 1.3e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03685 K09338 - gmx:100809075 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03685 5 96786407 96790521 Arst5g03685 5 96786407 96790521 ECH
Arst5g03685 5 96786407 96790521 Arst5g03685 5 96786407 96790521 PCT