Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03680 ATGGCTGCTGCTTCGAAGGCTGCGCGACAGAGGCTTCGAATGTTGCACGGGCTGCTGCGCGATGGAGGCGAAGTGACCGAGCACGAGGCGGTGGCTGTCCGAAGGAACGACGACGTCAACGGCACGAGACGGTGGCTAGACGGAGGTAGATATATTAGCATTGAATGCTTTGTGATGACTAATTTTGAGAAAGAAGAGGCAGCAGCACTTTCAGAAACACAAGCACAAGTATCTCATAAGAGACATGCTAGTTTTGAGGGACATGGTTGGCCAGTTACTAGTAAGAGAACAAGTCCCCTTATGAACATGAGTGGTCCAATATATGCTACCAATGGAACTGGAAACTTTTTGCACCAGGGTCTAGTTGTGACAGTAAACAAAGTTTGGAGTAACACAGAAAAATCTTCCAGTTCATCTGGCTTGGGCGAAAATCATTGGAACAACAACTATGCTAGAAAGAATGAACACTTGCTTAACTCCGGAGAACTTGGAATGTGTGATGATCCTTATTGTACTACTTGTCCTGCTAACTTCAAGGATTCTCATAGGAGAAATTCAAAAGCTTCAACAGCTTTTGATGCTAAGTTACAAGGTGCTCTCTATGGGGATGCCAAGTGTTACGCAAGAAGACTCTTCTCCTTCTGCTCTTCATTCTCTCCTGGAATTATTAACCCTCACACTAAACTTGTACAACAATGGAACAAGTTCCTGGCTATTTCTTGTTTATTTGCAATCTTTTTGGATCCGTTATTTTTCTTCCTAATCTATGTGCAGAAGGATTGCAAATGTATTGCTATAGATGGGAAAATGGCATCAACACTAGTTATATTTAGAAGTGTGAATGATTTTGTATATTTCTTAAACATCCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCAGAGTCTAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATTGCTCTACATTACTTGCGGACCTATTTTCTCATTGACTTATTTGTTGCACTTCCTCTTCCTCAGATAATGATAGTGTTTGTGCTTCCAAGGAATTTGGGGATGTCATCAGGAGCGAATTATGCTAAGAATATTCTTCGCGCGGCCGTTCTTGTGCAGTATATTCCCAGGTTATTCAGGTTTCTTCCATTGCTAATCGGCCAATCTCCATCAGGATTCATATTTGAGTCAGCATGGACAAATTTCATCATAAATCTTCTCATTTTTATGCTGTCTAGCCATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTGTGCAGAGGGTTAATCAATGTTTGCGAGATGCATGTCATAATTCTGATATTGATGAATGCATGAAAGTCATTGATTGTGGACATGGTCGTACTTTAGACGATCAATCTGGCAAAGCATCTGCTGGTTGGATCAACAATGTTGAGGCCATTGCTTGTTTAAATCCCTCTTCTAAGGCTTCTAATGGCTTTAGTTATGGGATCTATGCCAATGCTGTACCACTTACTACAGAAACTGACCTTGTCAACAAATATTTTTATGCTTTGTTTTGGGGTTTCCAGCAAATAAGTTCTCTCGGCAGTAGTCTAATCCCAAGTTATTTTGTGTGGGAAGTACTTTACACAATGGCAATCATAGGATTAGGACTCTTGCTTTTCGCGCTTCTCATTGGAAATATACAGAACTTTCTTCAGTCTCTTGGTCGGAGAAAGCTTGAAATGCAACTTAGAGGCCGTGATGTTGAGCGATGGATGAGCCATCGTCACTTGCCAGAAGATCTAAAAAAGAGAGTGCGCCAGGCCGAACGGTATAATTGGGCTGCAACAAGGGGAGTGAATGAAGAAATACTTATGGAAAATTTGCCAGAAGATCTTCAGAGAGACATAAGGCGTCATCTCTTCAAATTTATCAAGAAAGTCCGAATTTTTGCCTTGATGGATGAGCCAATCTTAGATGCTATTTGTGAGAGAATAAGACATAAGACATACATCAAAGGAAGTAGAATTTTGAATCATGGTGGCATTATAGAGAAAATGGTCTTTGTTGTTCGCGGGAAATTGGAGAGCGTTGGAGTCGATGGAATCGTAGTTCCCTTAGCTGAAGGGGATGCTTGTGGTAAAGAACTTTTGACATGGTATCTTGAACATTCTCTGGTGAGAACAGATGATAAGAAAGTAAGACTTCCAGGACAGAGGTTGCTTAGCAACAGGACGGTGAAGTGCTTAACAAATGTGGAGGTATTTTCACTCCGAGCGGCTGATCTTGAAGAAGTCACGATCTATTTCACAAGATTCTTGAGGAGTCCACATGTTCAAGGAGCTCTAAGGTATGAATCACCTTATTGGAGATCACTTGCAGCAACACGAATTCAGGTTGCCTGGAGATACAGGAAGAAACGTCTGAGTCGTTCTGATAGCCAAACAATCTAA 2406 0.4165 MAAASKAARQRLRMLHGLLRDGGEVTEHEAVAVRRNDDVNGTRRWLDGGRYISIECFVMTNFEKEEAAALSETQAQVSHKRHASFEGHGWPVTSKRTSPLMNMSGPIYATNGTGNFLHQGLVVTVNKVWSNTEKSSSSSGLGENHWNNNYARKNEHLLNSGELGMCDDPYCTTCPANFKDSHRRNSKASTAFDAKLQGALYGDAKCYARRLFSFCSSFSPGIINPHTKLVQQWNKFLAISCLFAIFLDPLFFFLIYVQKDCKCIAIDGKMASTLVIFRSVNDFVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIALHYLRTYFLIDLFVALPLPQIMIVFVLPRNLGMSSGANYAKNILRAAVLVQYIPRLFRFLPLLIGQSPSGFIFESAWTNFIINLLIFMLSSHVVGSCWYLFGVQRVNQCLRDACHNSDIDECMKVIDCGHGRTLDDQSGKASAGWINNVEAIACLNPSSKASNGFSYGIYANAVPLTTETDLVNKYFYALFWGFQQISSLGSSLIPSYFVWEVLYTMAIIGLGLLLFALLIGNIQNFLQSLGRRKLEMQLRGRDVERWMSHRHLPEDLKKRVRQAERYNWAATRGVNEEILMENLPEDLQRDIRRHLFKFIKKVRIFALMDEPILDAICERIRHKTYIKGSRILNHGGIIEKMVFVVRGKLESVGVDGIVVPLAEGDACGKELLTWYLEHSLVRTDDKKVRLPGQRLLSNRTVKCLTNVEVFSLRAADLEEVTIYFTRFLRSPHVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRSDSQTI 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03680 801 SUPERFAMILY cAMP-binding domain-like 562 753 IPR018490 -
Arst5g03680 801 Gene3D - 222 559 - -
Arst5g03680 801 ProSiteProfiles cAMP/cGMP binding motif profile. 634 702 IPR000595 -
Arst5g03680 801 Gene3D Helix hairpin bin 561 626 - -
Arst5g03680 801 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 166 796 - -
Arst5g03680 801 CDD CAP_ED 634 750 IPR000595 -
Arst5g03680 801 Gene3D Jelly Rolls 632 756 IPR014710 -
Arst5g03680 801 SUPERFAMILY Voltage-gated potassium channels 225 562 - -
Arst5g03680 801 Pfam Ion transport protein 236 562 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03680 Arst-Chr5 96602758 96610353 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03680 87 711 Ion Channels AT3G17700 58.917 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03680 K05391 - gmx:100781973 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03680 5 96602758 96610353 Arst5g03680 5 96602758 96610353 ECH