Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03677 ATGGCCAGAGTCACCATTCACGTGGAGCAATCTGAGACTGAAGGAGGAGAAGAAGCACCACCCCCATTAAGAATAGAAGTTGGGAACAAATATCTGGCAGCATCTGACTCGCTAGGATTATGTGATAAACCCTTTTGCAATACATGTCCCAACTATTTGAAGACTCCGAAACATGATTTAACTGATGATCATAAATGTGTTGGAGTCCTGTGGTTGGTCGCACAAAGAACATATATTCCCATCATATTCGTCATTGATCTTGTCCTTGGAACGAACATTATTTGGCGGTTTAGGATGGCTTATATTTCTTCTAAGCCAACAGGTGGTGGTGGATATTTAGTTGACGATCCAACAAAAATTGCTCTCCGTTACATACTAGCACCAAATGGGTTTGCTGTTGATTTCTTTCTCATGTTTCCTTTTTCTCTGGTGATGATATATGGTATCCCAAAAAGTGAGGTAGTGCCTACATTTTTTGGACGTCTTAATTCCTGGCTGCTTATAATGCTGATTGTGCAACAAGTCATCCAAATAGTGAAAATTTTCCCTAAAAAATTATTTGACGCGCATGGAACTATTTGGATTGTTTATGCAAAAAATGTTGCCGTCCTTGTACTAATTGGACATCTTGTTGGATGTTTCGGATATCTCGCTGCTGTACAGAAGGTTGAGAAATGTTTGCTAGCTACCTGCAATGCGTCTGGCATAATTGGATGTAAGAGTATCATCGTTTGTGACTCTAAGGCAAACAATGATGCAACTGAGTGGTTGATAAATAAAAATGCCAGCATCTGTTTCTCTAATACTTCTAGCAATGGGATCTTTGGTGATATAATACCACTTGTGGGATATCACTCATTTCGCAAATATATATTTACACTGTTTTGGGGTATCACGCAAATTAGTAACATTTCTGGTAAAACTCCAAGCATCTCTAATGTGGAAGAAGTCTTCTTCGTATGGGCTATCAGAGCATTGGCGATCTCAATTTTTGCACTTATATTTGGAAACATAACAAGTATTATTCAAGGTCTCAGTAGGAGGAAGATAGATACCATACTTAGACTCAATGAAATTGAACGATGGTCAAGGCATCGTCACCTACCAGAAGATTTAAGCAGGAGAATACTAGATGCTGAAATTCAGAATTGGGCTGCAACAAAAGGGATGAAGGAAGAAGAACTTTTGAAGAGTATGCCAAAGGATATCCAGAGAGACCTAACAAGGCATCAGTTTCTCCCCATTATTAAAAAGGTTCAACTCTTTGAAATCATGCACCAGTCAATTCTTGATGCTATCTGTATGGAATCAAAGTGGAAGCTGTACTTGGCAGACAGTACAATCATGTATCCAGGTGACTTAATAGAGATGATAGTCTTTATTGTGCATGGAAAACTGGAGATCAAGGACAGCAGTGGAACAAGCGTCCACATATCTGACGGGGATGCATGTTGCCAAGAACTCCTTTTCTGGTGTCTTCAGAGAGCTTCATCCAATAGTAGCACAGCATTATATGATTGA 1521 0.3938 MARVTIHVEQSETEGGEEAPPPLRIEVGNKYLAASDSLGLCDKPFCNTCPNYLKTPKHDLTDDHKCVGVLWLVAQRTYIPIIFVIDLVLGTNIIWRFRMAYISSKPTGGGGYLVDDPTKIALRYILAPNGFAVDFFLMFPFSLVMIYGIPKSEVVPTFFGRLNSWLLIMLIVQQVIQIVKIFPKKLFDAHGTIWIVYAKNVAVLVLIGHLVGCFGYLAAVQKVEKCLLATCNASGIIGCKSIIVCDSKANNDATEWLINKNASICFSNTSSNGIFGDIIPLVGYHSFRKYIFTLFWGITQISNISGKTPSISNVEEVFFVWAIRALAISIFALIFGNITSIIQGLSRRKIDTILRLNEIERWSRHRHLPEDLSRRILDAEIQNWAATKGMKEEELLKSMPKDIQRDLTRHQFLPIIKKVQLFEIMHQSILDAICMESKWKLYLADSTIMYPGDLIEMIVFIVHGKLEIKDSSGTSVHISDGDACCQELLFWCLQRASSNSSTALYD 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03677 506 Gene3D Jelly Rolls 419 505 IPR014710 -
Arst5g03677 506 MobiDBLite consensus disorder prediction 1 21 - -
Arst5g03677 506 Pfam Ion transport protein 83 348 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst5g03677 506 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 65 498 - -
Arst5g03677 506 SUPERFAMILY cAMP-binding domain-like 352 495 IPR018490 -
Arst5g03677 506 SUPERFAMILY Voltage-gated potassium channels 80 348 - -
Arst5g03677 506 Gene3D Helix hairpin bin 354 410 - -
Arst5g03677 506 PRINTS EAG/ELK/ERG potassium channel family signature 206 216 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst5g03677 506 PRINTS EAG/ELK/ERG potassium channel family signature 334 343 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst5g03677 506 PRINTS EAG/ELK/ERG potassium channel family signature 76 86 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst5g03677 506 PRINTS EAG/ELK/ERG potassium channel family signature 384 391 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst5g03677 506 PRINTS EAG/ELK/ERG potassium channel family signature 290 307 IPR003938 GO:0005249|GO:0006813|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03677 Arst-Chr5 96404068 96409483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03677 60 506 Ion Channels AT3G17700 33.406 1.07e-77 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03677 K05391 - adu:127747687 1012.68