Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03664 ATGAGTCCTCCTTTTGATCCTATCAGTAAGATCATTCCTCCACGTGAGGCCTGGAGGATCAAAGTCAGGGTACTAAGGGCTTGGACTGTACCTAGCTTTGGTAATGCAGATGTTCCAAATTCAATGGAACTTATTCTGGTTGATGAAAATTCTACCAAAATCCAGGCCACTATAAGGAAGCAACTAATACACAAGTTTAAAGATCATCTTCTTGAAGGCAGTTGTTATAAGATGAGTTATTTTGTTGTTGTTTCAAACCAAGGCTCTTATAGAGCTACAAAGCATGAGTTCAAACTCATTTTTCTATTTCGTACAACAGTGACAACAATTCCTGATGATATAATACCCAAGTCTTGTTTTTCTATATATCCCTTTGAAGACATATTGCAAATGAGTCAGGATCATGACTATTTAGTTGATGTAATTGGTCTTTTGACATTGGTTGGGGAAGAGAAAAACTATGACAGGGATGGTAAAACGGTTAAGATGGTTGTTGTCGAACTTTCTTCACAAAAGATGATGCTGCGATGCGCATTATTTGGAGAGTACGTGGACCAGTTAAATGATTTTCTTGCTTCTGGTTATGTTGAGCAACCGGTTGTCATTGTTCAACTTGCTAAGATTAAACTTTTTCGAGGTCAACCTGGTCTCCAGAATGTTATGAAAGCAACAAAAATTTACTTTAATCCTGATTTGTCAGAAGTTATTGATTTTCGAAAAAGCATGGTCGAACAAGGAATTAATGGCACTCAACCTTTATTCATTGCGAATGAGGGAAAATCCCTTTCATTGGAGGATGACTTCATGCGCCTAACTAGGCGATCCACAATAGATCAATTACATGATAACAAAGAGGATGGGAGTTTTGTTATTATGGGTACTATCACTGATATTGTTGAAGAGGGCTGTTGGTGGTATTCCACTTGTGTGTGTGGAAAGGCAGTTTATCCTGAGTCTGGGGTCTATTTCTGTGATGTTTGCATGCATCATGTGACAAATGTGATTCCAAGGTCCAGACTTAAAGTAGCAGTTTCTGATCATACTGGACAGGGCATATTCATTTTGTTTGATCGTGAAACAGCTTATTTGCTTAAAAAAGCATGTGCTGACCTTTTTAATGAAGTCCAAAAGGAGCCAACTGTTTTGTGTGGAGATAGCTATCCTATTACATTTAAAACTTTAGAGGGTAAAAAAGTTTTACTAAAAGTAGATACCAAGTCCCTTGGTATAGACAAATACTTTGGAACCTTTCGTGTAAAAAGGATATGTGATGACCCAACAATTATTTCTATGTTTGAGCTTGCTGAGAATGAGAACGAAGTGACACCTGTCAAGGATGCACATGTTCCTGGGATTGGTTTGGACATAGGTGAACCCTCTTATACACAGCCTACTTCAAAAGATGTTAAGCTTTCAGTCTTGGATAAGGATGAAAGTGTTCCTGGTCTTGATGACATTTCGATAGATATGGACGCTAATAGGAAATCTGTTGTTCCTCAAGTTTCTGGCGATAATGATGAGAATCAGGTCTTTAGTGATGAAGTTGGCTCATTGCTCAACTCAGGTGTTGAAGAAACTCAGGACTTCCTATCTCATCTTCTGGATAATTCGGACAACACTGATGTTTCTTTTATTTGCAATGATGTTGTGCGTTCCAAAGTAAAGAGAAACCTTGAATCAGATTTTCAGAAAGCCTTGGAGGAAACTGTTGGTCCTTCATCAAAGATGATCAAGATTGAAGATAATTTGGATGGATAG 1758 0.38 MSPPFDPISKIIPPREAWRIKVRVLRAWTVPSFGNADVPNSMELILVDENSTKIQATIRKQLIHKFKDHLLEGSCYKMSYFVVVSNQGSYRATKHEFKLIFLFRTTVTTIPDDIIPKSCFSIYPFEDILQMSQDHDYLVDVIGLLTLVGEEKNYDRDGKTVKMVVVELSSQKMMLRCALFGEYVDQLNDFLASGYVEQPVVIVQLAKIKLFRGQPGLQNVMKATKIYFNPDLSEVIDFRKSMVEQGINGTQPLFIANEGKSLSLEDDFMRLTRRSTIDQLHDNKEDGSFVIMGTITDIVEEGCWWYSTCVCGKAVYPESGVYFCDVCMHHVTNVIPRSRLKVAVSDHTGQGIFILFDRETAYLLKKACADLFNEVQKEPTVLCGDSYPITFKTLEGKKVLLKVDTKSLGIDKYFGTFRVKRICDDPTIISMFELAENENEVTPVKDAHVPGIGLDIGEPSYTQPTSKDVKLSVLDKDESVPGLDDISIDMDANRKSVVPQVSGDNDENQVFSDEVGSLLNSGVEETQDFLSHLLDNSDNTDVSFICNDVVRSKVKRNLESDFQKALEETVGPSSKMIKIEDNLDG 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03664 585 SUPERFAMILY Nucleic acid-binding proteins 272 425 IPR012340 -
Arst5g03664 585 SUPERFAMILY Nucleic acid-binding proteins 3 113 IPR012340 -
Arst5g03664 585 PANTHER OS03G0429900 PROTEIN 7 412 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst5g03664 585 Gene3D - 114 250 IPR012340 -
Arst5g03664 585 Pfam Domain of unknown function DUF223 43 138 IPR003871 -
Arst5g03664 585 SUPERFAMILY Nucleic acid-binding proteins 120 242 IPR012340 -
Arst5g03664 585 CDD RPA1_DBD_A_like 19 107 - -
Arst5g03664 585 Gene3D - 4 112 IPR012340 -
Arst5g03664 585 Pfam Replication factor-A C terminal domain 290 379 IPR013955 -
Arst5g03664 585 Gene3D - 265 427 IPR012340 -
Arst5g03664 585 CDD RPA1_DBD_B_like 140 242 - -
Arst5g03664 585 CDD RPA1_DBD_C 279 420 IPR047192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03664 Arst-Chr5 96303455 96306828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03664 7 349 Core DNA Replication Machinery Family AT2G06510 23.641 2.31e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03664 - - ahf:112711209 1138.25