Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03660 ATGAGCAACAACAGTTTATCAACAGTTGAACCAGACCAAGAGTTGTCAAGAGACATGGCTAGTTCCGGAAAAGATGAGGAACCAATGCTGTCAGACACTCATCTAAAGCAATCAAATGAACCTGTTAATTCTAAATTCCAAAATCCTGCACCTAGGACACGTAGCATATCAATTTCTATTCCCATGTTCTCGATGGAACCACGCGAAAGAGTAAGTGATATTAGGGGACACACAGGTCCCCTACGGAGTCAGAGAAAAATCCCACTTGATCAGATGAGTGGTCCATTGTATGTTTCCAATAAATCTGGAGCTCTCTTCCGGGCAGGGAAGCAACCAGCAGAAACCAAGACAGAAAACTTTCCTTCGTTTAGTGTCGGCATGGCTGAAAGTGATTTGCAAAACAACTATAATGGTAAAAATGAACATTTAGCAAAGTCTGGTCAACTGGGAATGTGCAATGATCCATATTGCACGACTTGCCCGACTTACTTCAAGGCCACTCAACAAAGGAATTCAAAAGCTTCGGGTATATTCAGTCCGAAGTTTCACAATTCCCTTTATGGGGATGCCAAGTGTTGGGCAAGAAGACTTTCTGCTTTCTTGATTCCTTATGTACCTCGGGTTATGAATCCTCATACAAAACTTGTTCAACAATGGAATAAGTTTTTTGCAATTTGTTGCTTGTTGGCAATTTTTGTGGATCCATTATTTTTCTTTTTGCTCTCTGTGCAGAAGGAACATAAATGTATTGTTATGAACACACCAATGACAACTTTGCTTGTTTTTCTTAGAAGCATGAACGATTTTGTATACCTCATAAACATTATTCTTCAGTTTCGGTTGGCTTATGTAGCTCCGGAGTCTAGGGTGGTTGGTGCTGGGGAATTAGTTGACCATCCTAAGAAAATTGCTCTTCATTACCTTCAAACATATTTTTTTCTTGACTTATTAGTTGTAATTCCACTTCCTCAGATAATCATATTGTTTGTAATACCACAAAACTTGGGATCATCAGGAGCAAATTATGCAAAGAATCTTTTGCGAGCTGTTATCCTTGTTCAGTATATTCCCAGATTGTGTAGGTTTCTACCAATGCTAATTTCTCCAACCGGATTCATATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTTTATGCTCTCTGGTCATGTTGTTGGGTCATGGTGGTACCTCTTTGCTTTGCAGAGGGTTAATCAATGTTTACGAGATGCCTGCAAGAAATCTGATATTCTTGAATGCAACAGATTCATTGACTGTGGTCATGAACATGCTGAAAAATATCGAAATAAAATGAATTGGAAGTATTGGATGAATGACACTAATTCATCAGCTTGTTTTACCGAAGATGGTTTTCCTTACGGGATTTATCTTAAAGGTGTCAACCTTACTGCAGAACATAATGTGATCACTAGATATGTATATTCATCGTTTTGGGGATTCCAGCAAATTAGTACTCTGGCTGGCAATTTGACCCCAAGCTACTTTGTTTGGGAAGTCCTTTTCACCATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTGGGACGCAGGAGGCTAGAAATGTCACTTAGGCGACGTGATGTGGAGCAGTGGATGAGTCATCGACGCTTAGCAGAAGACTTGAAAAGGAGAGTGCGACAAGCTGAACGTTACAACTGGGCTGCAACAAGAGGAGTGAATGAAGAAGTGCTTCTAGAAAATTTGCCTGAAGACCTTCAGCGGGACATTAGACGCCATCTCTTTAAATTTGTAAAGAAAGTTAGAATTTTTGCCTTGATGGACGAGCCTATCTTGGATGCCATCTGCGAAAGACTACGACAAAAAACGTACATCAAAGGAAGCATAGTTTTGTACAGTGGCGGTTTGGTAGAGAAGATAGTTTTTATCGTGCGTGGGAAATTGGAGAGCATAGGCGAAGACGGAAATGTATCTTTATCTGAAGGCGATGCTTGCGGCGAAGAACTTTTGACTTGGTGTCTTGAGCATACTTCAGCAAACAGAGATGGCAAAAAAGTAAAAATCCCAAGACAGAGGTTAGTTAGCAATAGAACAGTTACTTGCTTAACAAATGTGGAGGCTTTTTCTCTCACTGCGGCAGACCTTGAAGAAGTTACAAGCCTTTATGCACGATTCTTGAGGAGTCCGCGTGTTCATGGAGCCATTAGGTATGAATCACCTTATTGGAGATGCTTTGCAGCAACGCGCATTCAGGTTGCATGGAGGTACAGGAAGAAACGTCTTAGTAGAGCTGACACTTCACAATCATATGAAACATTATATACATAA 2355 0.4042 MSNNSLSTVEPDQELSRDMASSGKDEEPMLSDTHLKQSNEPVNSKFQNPAPRTRSISISIPMFSMEPRERVSDIRGHTGPLRSQRKIPLDQMSGPLYVSNKSGALFRAGKQPAETKTENFPSFSVGMAESDLQNNYNGKNEHLAKSGQLGMCNDPYCTTCPTYFKATQQRNSKASGIFSPKFHNSLYGDAKCWARRLSAFLIPYVPRVMNPHTKLVQQWNKFFAICCLLAIFVDPLFFFLLSVQKEHKCIVMNTPMTTLLVFLRSMNDFVYLINIILQFRLAYVAPESRVVGAGELVDHPKKIALHYLQTYFFLDLLVVIPLPQIIILFVIPQNLGSSGANYAKNLLRAVILVQYIPRLCRFLPMLISPTGFIFESAWANFFINLLTFMLSGHVVGSWWYLFALQRVNQCLRDACKKSDILECNRFIDCGHEHAEKYRNKMNWKYWMNDTNSSACFTEDGFPYGIYLKGVNLTAEHNVITRYVYSSFWGFQQISTLAGNLTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLAEDLKRRVRQAERYNWAATRGVNEEVLLENLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQKTYIKGSIVLYSGGLVEKIVFIVRGKLESIGEDGNVSLSEGDACGEELLTWCLEHTSANRDGKKVKIPRQRLVSNRTVTCLTNVEAFSLTAADLEEVTSLYARFLRSPRVHGAIRYESPYWRCFAATRIQVAWRYRKKRLSRADTSQSYETLYT 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03660 784 Gene3D - 221 537 - -
Arst5g03660 784 MobiDBLite consensus disorder prediction 1 15 - -
Arst5g03660 784 MobiDBLite consensus disorder prediction 17 33 - -
Arst5g03660 784 SUPERFAMILY cAMP-binding domain-like 540 734 IPR018490 -
Arst5g03660 784 MobiDBLite consensus disorder prediction 1 61 - -
Arst5g03660 784 Pfam Ion transport protein 219 540 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst5g03660 784 Gene3D Jelly Rolls 610 733 IPR014710 -
Arst5g03660 784 MobiDBLite consensus disorder prediction 34 60 - -
Arst5g03660 784 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 152 774 - -
Arst5g03660 784 ProSiteProfiles cAMP/cGMP binding motif profile. 612 679 IPR000595 -
Arst5g03660 784 CDD CAP_ED 612 736 IPR000595 -
Arst5g03660 784 Gene3D Helix hairpin bin 540 604 - -
Arst5g03660 784 SUPERFAMILY Voltage-gated potassium channels 211 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03660 Arst-Chr5 96258507 96273367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03660 19 689 Ion Channels AT3G17700 61.380 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03660 K05391 - gmx:100795955 1147.5