Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst5g03651 | ATGTGTACTAGAGGACATTGGAGACCAGCTGAAGATGAGAAGCTTAGGGAGCTGGTGGAACGCTATGGACCTCATAATTGGAATGATGTTATGATTTCTTTTTAAAATTTTACAGGGAAAAGTTGTAGGTTAAGATGGTTCAATCAATTGGACCCAAGAATAAATAGAAACCCGTTCACAGAGGAAGAAGAAGAACGGCTTTTAGCATCTCATAGTATTCATGGAAATAGATGGTCAGTGATTGCAAGACACTTCCCTGGAAGAACTGATAATGCTGTGAAGAATCATTGGCATGTGATGATGGCAAGAATACGCAGAGAAAGATCTAAAGTTTATGCAAAACGACCACTTCATCATAGAACATTTTTTTCTCCAAACCTTCAACAACAACAACAAGAGGATCATGATGATGAGACAACAAACTTTGACACAAAAAATAATATATCATACTGTCTTGTTGACAAGTTTCATGGAAAATATAGCTACCCTGCTTGTCTCACTTATGCTACTTTCCAACTTCCTAACAAGTTTCACTTTCAAGGTCCAACTTCTTGTGCTACATTGCTTCAAGAAAGAAGTCAATCAATTGAATTCTATGACTTTCTTCGAGTAAACACAGATTCCAACAAGAGTGAAGTGAGTAACAACAATGGCAAAAAGGAAGATGAAGAAGTGAATCAAGATCCTGTGGGGCATCACAACAAGGATGGAATTCCATTCATTGATTTTTTGTCTACTCAAAGTTCCTAA | 750 | 0.3707 | MCTRGHWRPAEDEKLRELVERYGPHNWNDVMISFXNFTGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHSIHGNRWSVIARHFPGRTDNAVKNHWHVMMARIRRERSKVYAKRPLHHRTFFSPNLQQQQQEDHDDETTNFDTKNNISYCLVDKFHGKYSYPACLTYATFQLPNKFHFQGPTSCATLLQERSQSIEFYDFLRVNTDSNKSEVSNNNGKKEDEEVNQDPVGHHNKDGIPFIDFLSTQSS | 249 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst5g03651 | 249 | Gene3D | - | 4 | 55 | - | - | |
Arst5g03651 | 249 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 51 | 105 | IPR017930 | - | |
Arst5g03651 | 249 | SUPERFAMILY | Homeodomain-like | 4 | 97 | IPR009057 | - | |
Arst5g03651 | 249 | ProSiteProfiles | Myb-like domain profile. | 51 | 101 | IPR001005 | - | |
Arst5g03651 | 249 | MobiDBLite | consensus disorder prediction | 214 | 231 | - | - | |
Arst5g03651 | 249 | Gene3D | - | 57 | 139 | - | - | |
Arst5g03651 | 249 | MobiDBLite | consensus disorder prediction | 209 | 238 | - | - | |
Arst5g03651 | 249 | FunFam | MYB transcription factor | 4 | 55 | - | - | |
Arst5g03651 | 249 | SMART | sant | 3 | 52 | IPR001005 | - | |
Arst5g03651 | 249 | SMART | sant | 55 | 103 | IPR001005 | - | |
Arst5g03651 | 249 | CDD | SANT | 7 | 48 | IPR001005 | - | |
Arst5g03651 | 249 | CDD | SANT | 58 | 101 | IPR001005 | - | |
Arst5g03651 | 249 | ProSiteProfiles | Myb-like domain profile. | 4 | 50 | IPR001005 | - | |
Arst5g03651 | 249 | PANTHER | MYB PROTEIN-RELATED | 4 | 150 | - | - | |
Arst5g03651 | 249 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 1 | 50 | IPR017930 | - | |
Arst5g03651 | 249 | Pfam | Myb-like DNA-binding domain | 56 | 99 | IPR001005 | - | |
Arst5g03651 | 249 | Pfam | Myb-like DNA-binding domain | 4 | 50 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst5g03651 | Arst-Chr5 | 96177993 | 96181842 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst5g03651 | 1 | 249 | MYB Transcription Factor Family | AT1G17950 | 50.394 | 4.28e-78 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Arst5g03651 | Myb_DNA-binding | 1.8e-10 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst5g03651 | K09422 | - | gmx:100811746 | 316.235 |