Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03651 ATGTGTACTAGAGGACATTGGAGACCAGCTGAAGATGAGAAGCTTAGGGAGCTGGTGGAACGCTATGGACCTCATAATTGGAATGATGTTATGATTTCTTTTTAAAATTTTACAGGGAAAAGTTGTAGGTTAAGATGGTTCAATCAATTGGACCCAAGAATAAATAGAAACCCGTTCACAGAGGAAGAAGAAGAACGGCTTTTAGCATCTCATAGTATTCATGGAAATAGATGGTCAGTGATTGCAAGACACTTCCCTGGAAGAACTGATAATGCTGTGAAGAATCATTGGCATGTGATGATGGCAAGAATACGCAGAGAAAGATCTAAAGTTTATGCAAAACGACCACTTCATCATAGAACATTTTTTTCTCCAAACCTTCAACAACAACAACAAGAGGATCATGATGATGAGACAACAAACTTTGACACAAAAAATAATATATCATACTGTCTTGTTGACAAGTTTCATGGAAAATATAGCTACCCTGCTTGTCTCACTTATGCTACTTTCCAACTTCCTAACAAGTTTCACTTTCAAGGTCCAACTTCTTGTGCTACATTGCTTCAAGAAAGAAGTCAATCAATTGAATTCTATGACTTTCTTCGAGTAAACACAGATTCCAACAAGAGTGAAGTGAGTAACAACAATGGCAAAAAGGAAGATGAAGAAGTGAATCAAGATCCTGTGGGGCATCACAACAAGGATGGAATTCCATTCATTGATTTTTTGTCTACTCAAAGTTCCTAA 750 0.3707 MCTRGHWRPAEDEKLRELVERYGPHNWNDVMISFXNFTGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHSIHGNRWSVIARHFPGRTDNAVKNHWHVMMARIRRERSKVYAKRPLHHRTFFSPNLQQQQQEDHDDETTNFDTKNNISYCLVDKFHGKYSYPACLTYATFQLPNKFHFQGPTSCATLLQERSQSIEFYDFLRVNTDSNKSEVSNNNGKKEDEEVNQDPVGHHNKDGIPFIDFLSTQSS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03651 249 Gene3D - 4 55 - -
Arst5g03651 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Arst5g03651 249 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Arst5g03651 249 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Arst5g03651 249 MobiDBLite consensus disorder prediction 214 231 - -
Arst5g03651 249 Gene3D - 57 139 - -
Arst5g03651 249 MobiDBLite consensus disorder prediction 209 238 - -
Arst5g03651 249 FunFam MYB transcription factor 4 55 - -
Arst5g03651 249 SMART sant 3 52 IPR001005 -
Arst5g03651 249 SMART sant 55 103 IPR001005 -
Arst5g03651 249 CDD SANT 7 48 IPR001005 -
Arst5g03651 249 CDD SANT 58 101 IPR001005 -
Arst5g03651 249 ProSiteProfiles Myb-like domain profile. 4 50 IPR001005 -
Arst5g03651 249 PANTHER MYB PROTEIN-RELATED 4 150 - -
Arst5g03651 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Arst5g03651 249 Pfam Myb-like DNA-binding domain 56 99 IPR001005 -
Arst5g03651 249 Pfam Myb-like DNA-binding domain 4 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03651 Arst-Chr5 96177993 96181842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03651 1 249 MYB Transcription Factor Family AT1G17950 50.394 4.28e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst5g03651 Myb_DNA-binding 1.8e-10 CL0123