Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03624 ATGTTAGCGAATAACTCTTCAGTAGCTCCAAGTTCAGAACCATTTTCTTGTGCTGATAATAGTAATGGCACTCCAAGCAATAAAAGGAAGAGAAGACCCGCAGGAACACCAGATCCAGATGCAGAGGTGGTGTCGCTGTCGCCAAAGACGTTATTGGAATCGGATCGATATGTGTGTGAGATCTGCAACCAAGGCTTCCAAAGGGACCAGAACCTGCAGATGCATCGGAGGAGGCACAAGGTGCCGTGGAAGCTTCTAAAGAGGGAGACGCCGGTGGTCAGGAAGAGGGTCTTCGTGTGTCCGGAGCCTACTTGCCTGCACCACGACCCTTGTCACGCACTCGGAGACCTTGTTGGGATCAAGAAGCACTTCCGCCGCAAGCACAGCAACCACAAACAGTGGGTCTGCGAGCGCTGCTCCAAGGGCTACGCGGTGCAGTCCGATTACAAGGCTCACCTCAAGACCTGCGGCACTCGCGGCCACTCTTGTGACTGCGGCCGCGTCTTCTCCAGGGTGGAGAGCTTTATTGAGCATCAAGATGCTTGCAACATGGGGAGGCTTAGGACGGAATCTCATCATAATCATAATCATAATCATCAACCACCACCAACTCCAACTGCATGTTTATCAAGAACAGCTTCAAGTCCAAGCCCTTCAAGAAGTGAAACCAATTTCAGCACTGCTCCATGGCAACCAACATCATCAACAACAACAACAACAACAACAACAACACCAACAAGCCTTGTTGTGATCACAAAACCAATAACAACAACCACAGAACCACCTTTCTTCAACAACACTAACCCTACCCCAATTCTAGCCACTGCTGAAACATTCCTATTCAAGAAGAGTAACACCAGCAACAAACTCCATCACCCAAACTTGGATCTTCAGCTCTCCACCACCACCACCACCACCACCATGATGATGAACAACAACAATTCGATCCCCAATGTTGATTTAACACTATCACCAAAGAGTGATAATAATCATCATCAGCAGCTTCAAAACCAGCAGCATTCAACACAGCTGCAACTCTCCATTGGTGGAACAACCTCGTCAGACATTAGCGAGAACAATAACAAGAACGATTCATCAAACAGGAACTCGTCACCGAAAGAGAGCATCAACAGCAGCAACGAGAACAAGCATGCGACAGCAACAAGCATGGCTTTACGGGTTCAAGAACAAGCGAGGGAGCAACTAAGGTTAGCCATGGCGGAGAAAGCGTACGCAGAAGAAGCAAGGAAACAAGCAAAGAGGCAGATAGAAATGGCGGAACAAGAGTTCAACAATGCAAAGAGGATAAGGCAACAAGCGCAAGCTGAACTCGACAAAGCTTGCGCTCTCAAGGAACATGCAATGAAGAAGATAAACTCAACCATCATGCAAATTACGTGCCATTCTTGCAAGCAACACTTTCATCTTCAACCACCACCAGTATCTGCTACAGCACCACCAGATGAAAATTCCTTGGTTCTCAGTTACATGTCTTCTGGAATCACCACCGAAGGTGCTGGAGAAGTTATAGAGAACAATAATAACGATCATGATACTACTACTACTACTATTACTGATAATAATAATAATAATGGGAAGAAAGCATCTACAGCTACTAACTCTTAG 1626 0.4662 MLANNSSVAPSSEPFSCADNSNGTPSNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGRLRTESHHNHNHNHQPPPTPTACLSRTASSPSPSRSETNFSTAPWQPTSSTTTTTTTTTPTSLVVITKPITTTTEPPFFNNTNPTPILATAETFLFKKSNTSNKLHHPNLDLQLSTTTTTTTMMMNNNNSIPNVDLTLSPKSDNNHHQQLQNQQHSTQLQLSIGGTTSSDISENNNKNDSSNRNSSPKESINSSNENKHATATSMALRVQEQAREQLRLAMAEKAYAEEARKQAKRQIEMAEQEFNNAKRIRQQAQAELDKACALKEHAMKKINSTIMQITCHSCKQHFHLQPPPVSATAPPDENSLVLSYMSSGITTEGAGEVIENNNNDHDTTTTTITDNNNNNGKKASTATNS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03624 541 MobiDBLite consensus disorder prediction 312 388 - -
Arst5g03624 541 FunFam protein indeterminate-domain 12-like 36 104 - -
Arst5g03624 541 MobiDBLite consensus disorder prediction 1 29 - -
Arst5g03624 541 SUPERFAMILY beta-beta-alpha zinc fingers 54 80 IPR036236 -
Arst5g03624 541 MobiDBLite consensus disorder prediction 1 44 - -
Arst5g03624 541 CDD ATP-synt_Fo_b 373 458 - -
Arst5g03624 541 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Arst5g03624 541 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
Arst5g03624 541 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 17 417 IPR031140 -
Arst5g03624 541 Pfam Zinc-finger of C2H2 type 57 75 - -
Arst5g03624 541 Coils Coil 402 457 - -
Arst5g03624 541 MobiDBLite consensus disorder prediction 198 245 - -
Arst5g03624 541 MobiDBLite consensus disorder prediction 511 541 - -
Arst5g03624 541 SMART c2h2final6 134 161 IPR013087 -
Arst5g03624 541 SMART c2h2final6 98 128 IPR013087 -
Arst5g03624 541 SMART c2h2final6 57 79 IPR013087 -
Arst5g03624 541 MobiDBLite consensus disorder prediction 190 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03624 Arst-Chr5 95865574 95868966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03624 393 508 C2H2 Transcription Factor Family AT2G01940 59.322 1.11e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst5g03624 zf-met 0.031 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03624 K25871 - gmx:100800187 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03624 5 95865574 95868966 Arst5g03624 5 95865574 95868966 ECH
Arst5g03624 5 95865574 95868966 Arst5g03624 5 95865574 95868966 PCT