Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03621 ATGGAAGGAGGAGTAGTACCATCGTCTTCTTCTTCCTCAGCATATAGAGAGTGCTTGAGGAACCATGCAGCCAGCCTCGGCAGCTATGCCACCGACGGCTGCGGAGAGTTCACCTTGGATGACATCAGCGGTGGCAGCAATAGTCTGCAGTGTGCAGCATGTGGCTGCCACCGCAATTTTCATCGCAAAGTGAACAATTACCCTCAGAACGGAGCGTCCCCTTCTGAGGGTACTGCAAACACGGCTCACGAGCTCATGAACTACTCAGAAGAGCGCGCCATAGCCGAAGAAGGCATAGAAAGAGGAATAATAATGGGAACTAATAATAATAATATTAATATTAATAGCAGCAGCAACAACAAAAAGAGGTTCAGGACGAAATTCAGCGAGGAGCAGAAGGAGAAGATGTTAGGGTTTGCGGAGAAGATTGGTTGGAAGCTTCAAAGAATTAGCAAAGAGACTGAAGATGAAGTTGAGAGGTTCTGTAGAAGTGTTGGTGTGAGTAGACAAGTTTTCAAGGTTTGGATGCATAACCACAAGAACAATTCTTCCTTTAATTCTTCTAATTCTGCTTCCAATGGCAATGCTTCATCTCTCACTCAGTAG 606 0.4554 MEGGVVPSSSSSSAYRECLRNHAASLGSYATDGCGEFTLDDISGGSNSLQCAACGCHRNFHRKVNNYPQNGASPSEGTANTAHELMNYSEERAIAEEGIERGIIMGTNNNNININSSSNNKKRFRTKFSEEQKEKMLGFAEKIGWKLQRISKETEDEVERFCRSVGVSRQVFKVWMHNHKNNSSFNSSNSASNGNASSLTQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03621 201 NCBIfam homeobox domain, ZF-HD class 121 181 IPR006455 -
Arst5g03621 201 MobiDBLite consensus disorder prediction 182 201 - -
Arst5g03621 201 Pfam ZF-HD protein dimerisation region 14 65 IPR006456 -
Arst5g03621 201 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 15 64 IPR006456 -
Arst5g03621 201 FunFam Zinc-finger homeodomain protein 2 107 185 - -
Arst5g03621 201 Gene3D - 106 186 - -
Arst5g03621 201 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 11 182 - -
Arst5g03621 201 SUPERFAMILY Homeodomain-like 109 181 IPR009057 -
Arst5g03621 201 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 15 63 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03621 Arst-Chr5 95760229 95760983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03621 15 181 ZF-HD Transcription Factor Family AT4G24660 42.541 9.74e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Arst5g03621 ZF-HD_dimer 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03621 - - adu:107490538 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03621 5 95760229 95760983 Arst5g03621 5 95760229 95760983 PCT