Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03605 ATGGGTGAGAATGTGATTCCTGATCTATCACTGCAGATAAGCCTGCCAAAGAGTGCTCCACCATCAATATGCAATAATGAAGAAGAAGGAGATTGTGGAGGGTTTGATATATGGAGAAGTAGCACTACTACTAGTGATGGTGCTGAAAAATCACACAGTGATGGTTCCATTTCAATCCCTACTACTCTTCTTCATCATCATAAGAACATGGAGACACAACTCTCTTTAGCAGCACCTACAACCCCAACCCCTTCTGAAGCTGAAAGCCCTTGGAACAAATCATCATCGTCATCAGAGCAAGTAGTAATTAGGCCTATCAATGGAATCCCTCTTTACAACAACAACAACACTCCTTCTTCGCCACTTTCAAGGTTTAATAATGCTATAACTATGGAGAGTCTAAGAACCCTTAATCACCATCACTTATTTGGGGTTATTGGGGGTGCTAACAACAACACTGACTTCACAAACGGGTTTGTGATGAGGTCTAGAATGTTCCCATCAACAACAACAACAACAACAAGGATGATGATTCATAGCAGCAAGAGGAACATGAGGGCTCCAAGAATGCGCTGGACTACCTCCCTCCATGCCCGATTTGTTCACGCTGTTCAACTCCTTGGCGGCCATGAAAGAGCTACTCCAAAGTCAGTTCTGGAACTCATGGATGTCAAAGATCTAACACTCGCTCATGTCAAGAGTCACTTGCAGATGTATAGAACTGTTAAGAATACTGACAAGCCAGCAGCTTCCTCAGATGGAGATGAAGATTTCATGTCCCTAGCATCACCCATTAGTCAAAATAAGAACTTTTTACCAAATCAAAGAGGGCCCCCAAATAATAATAATGCATCTCTAGATCAAGATTTGGGATACAACACCACTACTGCTACTACTTGCAGCAATAAAAATCTATGGGGTAATTCTTCTTCCAGTAGAGAAGCATGGATACAAGCCAACGAGCGTAGTCCAGAAACCCTATCATCTCAACACATTATGGGGAAGCTCTCCGAGGGAAGCAACCATATACAATCAAGAAGCTTCAAGGATCAAAATAATTTAGATTGTCAGAATAATCCAAGCTTGGAATTCACCTTAGGGAGATGA 1107 0.4201 MGENVIPDLSLQISLPKSAPPSICNNEEEGDCGGFDIWRSSTTTSDGAEKSHSDGSISIPTTLLHHHKNMETQLSLAAPTTPTPSEAESPWNKSSSSSEQVVIRPINGIPLYNNNNTPSSPLSRFNNAITMESLRTLNHHHLFGVIGGANNNTDFTNGFVMRSRMFPSTTTTTTRMMIHSSKRNMRAPRMRWTTSLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLASPISQNKNFLPNQRGPPNNNNASLDQDLGYNTTTATTCSNKNLWGNSSSSREAWIQANERSPETLSSQHIMGKLSEGSNHIQSRSFKDQNNLDCQNNPSLEFTLGR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03605 368 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 7 368 IPR044847 GO:0000976|GO:0006355|GO:0010158
Arst5g03605 368 NCBIfam myb-like DNA-binding domain, SHAQKYF class 188 241 IPR006447 GO:0003677
Arst5g03605 368 MobiDBLite consensus disorder prediction 76 99 - -
Arst5g03605 368 Pfam Myb-like DNA-binding domain 189 240 IPR001005 -
Arst5g03605 368 SUPERFAMILY Homeodomain-like 185 242 IPR009057 -
Arst5g03605 368 MobiDBLite consensus disorder prediction 267 288 - -
Arst5g03605 368 MobiDBLite consensus disorder prediction 348 368 - -
Arst5g03605 368 Gene3D - 187 244 - -
Arst5g03605 368 MobiDBLite consensus disorder prediction 35 59 - -
Arst5g03605 368 FunFam Myb family transcription factor 186 244 - -
Arst5g03605 368 MobiDBLite consensus disorder prediction 37 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03605 Arst-Chr5 95525915 95534417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03605 104 368 G2-like Transcription Factor Family AT5G16560 43.042 1.74e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst5g03605 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03605 - - aip:107644092 672.93