Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03592 ATGGTGCTAGGTTGGAGTAGAAGGAGGAAGAACAACAATCACAAGGCTAATGGAAAACCAAGCATGGAGCTAGTGATTCCAAACCATTTCAGGTGCCCAATTTCCTTAGACCTAATGAAAGATCCTGTGACATTATCAACCGGCATAACATACGACAGAGAAAGCGTTGAAAGATGGTTTGATGATGGGAATTTCAAGTGCCCTGTCACAAACCAGATTGTGAAGAACTTTGACATGATCCCAAACCATTCTCTGAGGATGATGATCCAAGATTGGTGTGTGGAGAATAGGCAGCATGGTGTTGAGAGGATCCCAACACCAAAGATCCCAATTAGCCCAACCGATGTCTCTGATCTTCTTCTGCAACTTAAGGAATCTTCACTGCGCTTGGAACAGTTTACTTGCCTTGAATTGATTCAGAAGATGGAGAGATGGGGTGCTGAGAGTGAAAGAAATAAGAGGATTATAGTTGATAACGGAGCACCAGCTGCATTGGCCTCATCATTTGATTCATTTGCAGGTGATTCGGTTGAGAGAAATGTGGGTGTTCTTGATGAGATCCTTTCAGCACTGAAATGGATGTTCCCACTTCAATTGGAGGCTCAGAAATCATTGGGGTCCATTGCATCATTGAGCTGTATGGTTTGGTTCTTGAAGCACCAAGACCTCCCTGGAAAAGAAAAATCCATTGTTGCATTGAAGGAGCTTCTCTCCTTTGGTGACAGTAATAATGTTGAGGCACTTTCAAAGATTGAAGGAGTCAACGAACTCTTGGTGGAATTGGTCAACAAGAGAATTAGTCCAACAATAACAAAGAACTCACTGAGGGTGATCTGGTACATGGTTTCATCATCAAAATCTGAATGTGGTGAGAAGATGAAGATTTCATTTGTGGAGTTGGGATTTGTGAATACCCTTTTGGGAGTCCTAATTGATTCAGAAAAGAGCATTTGTGAGAAGGCTTTGGCAATCTTTGATTGTCTTTGTAGCAGTGAGAAAGGGAGAGAAAGTGCTCTTGGGAATGATCTAACTGTTCCTGTTTTGGTGAAGAAGGTTCTGAGGATTTCTTCACTCAGCACTGATTACTCTGTGTCTGCAATATGGAAGATGTGCAAATTTGGAGAAAGAGGTGATGAAGAAGGGAAGGTTCTTGTTGAGGCTCTTCAAGTTGGTGCATTCCAGAAGCTTCTCTTGGTTTTGCAGGTTGGTTGTGGTGATTCCACAAAGGAAAAAGCCACTGAGCTTCTCAAGTTGATGAATCCTTATAGGGCTGAATTGGAATGCATTGACTCTGATTTCAAGAATCTTAAGAGATCCTTCTAA 1323 0.4203 MVLGWSRRRKNNNHKANGKPSMELVIPNHFRCPISLDLMKDPVTLSTGITYDRESVERWFDDGNFKCPVTNQIVKNFDMIPNHSLRMMIQDWCVENRQHGVERIPTPKIPISPTDVSDLLLQLKESSLRLEQFTCLELIQKMERWGAESERNKRIIVDNGAPAALASSFDSFAGDSVERNVGVLDEILSALKWMFPLQLEAQKSLGSIASLSCMVWFLKHQDLPGKEKSIVALKELLSFGDSNNVEALSKIEGVNELLVELVNKRISPTITKNSLRVIWYMVSSSKSECGEKMKISFVELGFVNTLLGVLIDSEKSICEKALAIFDCLCSSEKGRESALGNDLTVPVLVKKVLRISSLSTDYSVSAIWKMCKFGERGDEEGKVLVEALQVGAFQKLLLVLQVGCGDSTKEKATELLKLMNPYRAELECIDSDFKNLKRSF 440
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03592 440 SUPERFAMILY RING/U-box 21 102 - -
Arst5g03592 440 MobiDBLite consensus disorder prediction 1 20 - -
Arst5g03592 440 Pfam U-box domain 26 97 IPR003613 GO:0004842|GO:0016567
Arst5g03592 440 PANTHER WDSAM1 PROTEIN 22 420 IPR045185 GO:0061630
Arst5g03592 440 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 104 IPR013083 -
Arst5g03592 440 FunFam RING-type E3 ubiquitin transferase 26 97 - -
Arst5g03592 440 SUPERFAMILY ARM repeat 114 406 IPR016024 -
Arst5g03592 440 SMART Ubox_2 29 92 IPR003613 GO:0004842|GO:0016567
Arst5g03592 440 CDD RING-Ubox_PUB 27 79 IPR045210 -
Arst5g03592 440 Gene3D - 118 431 IPR011989 -
Arst5g03592 440 ProSiteProfiles U-box domain profile. 25 99 IPR003613 GO:0004842|GO:0016567
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst5g03592 Arst-Chr5 95306443 95308648 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03592 3 440 U-box Gene Family AT5G37490 41.741 1.06e-111 334
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03592 5 95306443 95308648 Arst5g03592 5 95306443 95308648 PCT