Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03562 ATGCATCGCAACAAACTCATCATTCTCTTCTTCCTCATCCTCCTTCCTTATGCCAAACCCGACCTCTCTTCCGCCCAACGAGCCGCACTCCTCAACCTACGCTCCGCCGTCGGAGGCCGCACGCTCCTCCTCTGGCTCCCAACCTCTACAACCTCCCCATGCAAGTGGCCAGGCATTCTCTGCGACCCAACCAACACCCACGTCATCGCCCTCCGCCTCCCCGCCGCCTCACTCTCCGGCCACCTCCCCTCCGCCGTGTTTCCCTCCTTCACCCACCTCCGCACCCTCTCTTTCCGCTTTAACTCACTCTCCGGCCCCATTCCCGCCGACCTCTCCCTCTGCTCCTCCCTCCGCAACCTCTACCTCCACCATAACAACCTCTCCGGCGAGCTTCCACCTTCTCTCTTCAACCTCACCTCTCTCGTTCGCCTCAACCTGGCAGATAACGCCTTTTCAGGCCCGGTTCGAACCGGCTTCAACAATTTGACCCGCTTGAGGACCCTCTACCTCGAGAACAACCGGTTTTCCGGGTCGCTACCCGAGTTGAAAAGACTCGCCGAGTTGGCTCAGTTCAACGTTTCCAACAACTTTCTCAACGGTTCTGTGCCTGAAACGTTGACGGGCTTCTCAAAGGAGTCATTTTTAGGGAACACATTGTGTGGGAAGCCATTGAAGTTGTGTCCTCAGAGTGAGAATGGGAGAAGGGCAAATGGGTCTTTTCCAGGCGTGGCTGCCGGAATTGGGAACAGTGGTTTGAAGGAGGAGAAGAAAGGGAAGCTAAGTGGTGGGGTCATTGCTGGGATTGTGATTGGGTGTGTGGTTGGAATGTTGCTAATTGTGTTTGCTTTGATTCTTCTGTGTAGGAAGAAGAGTGATAACAGAACCAGTAACATTGAAAATATTGCAACTTTGAAGCAGGGTAATGGTAGGGGAATCCATGGTGAGAAAAATCATGTTTCTGAAGTGGAGACTGTCGGTGGTGGTGCGAACAAGAAGCTGGTTTTCTTTGGGAATTCAGAAGGGAAGGTGTTTGATTTGGAGGATTTGCTTAGAGCCTCTGCTGAGGTTTTAGGGAAGGGTACTTTTGGAACTTCATATAAGGCTGTGTTGGAGAATGGGCCTGTGGTGGCTGTGAAGAGGCTCAAGGATGTGACACTCTCTGAGAGTGACTTCAGGGATGAGATTGAGGTTGCTGGAGCAATGGTTCATCAGAATTTGGTGCCTCTTAGGGCTTACTATTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTATATGCATATGGGAAGCTTGTCTGCACTCTTGCATGGAAACAAAGGAGCTGGCAGAACACCACTGACTTGGGAACTCAGGTCAGGGATTGCGCTTGGAGCTGCTCGCGCCGTTGAGTACTTACATTCACAAGGGCCTAATGTATCTCATGGAAACATAAAGTCATCAAACATCCTCCTAACCAAGAACTATGAAGCCAGAGTATCCGACTTTGGCCTTGCACAACTTGTTAGCCCCTCGTCGACCCCCAATAGGATTGCCGGCTACCGTGCTCCTGAGGTAACTGATCCTCGCAGAGTGTCTCACAAGGCCGATGTGTACAGCTTTGGCGTGGTGCTCTTGGAGCTTCTTACCGGAAAGGCTCCAACTCACGCCTTGTTGCATGAGGAAGGAGTGGACCTTCCGAGATGGGTGCAATCGGTTGTTAGGGAAGAGTGGACTTCTGAGGTCTTTGATGCTGAGCTCCTTAGCCATCAGACTGTGGAAGAGGATATGGTTGAGTTGTTGCAGCTTGCAGTGGATTGTACAGCTCCATATCCCGATAATCGACCTTCGATCGCCGAAGTGAGACACCGGATAGAAGAGCTACGTGGTTCTAAGGATCTAAAGCAAACCCAGCACCAACATGATTTGATCAGTGTTGTAGATGATCTATCTTGA 1932 0.5124 MHRNKLIILFFLILLPYAKPDLSSAQRAALLNLRSAVGGRTLLLWLPTSTTSPCKWPGILCDPTNTHVIALRLPAASLSGHLPSAVFPSFTHLRTLSFRFNSLSGPIPADLSLCSSLRNLYLHHNNLSGELPPSLFNLTSLVRLNLADNAFSGPVRTGFNNLTRLRTLYLENNRFSGSLPELKRLAELAQFNVSNNFLNGSVPETLTGFSKESFLGNTLCGKPLKLCPQSENGRRANGSFPGVAAGIGNSGLKEEKKGKLSGGVIAGIVIGCVVGMLLIVFALILLCRKKSDNRTSNIENIATLKQGNGRGIHGEKNHVSEVETVGGGANKKLVFFGNSEGKVFDLEDLLRASAEVLGKGTFGTSYKAVLENGPVVAVKRLKDVTLSESDFRDEIEVAGAMVHQNLVPLRAYYYSRDEKLLVHDYMHMGSLSALLHGNKGAGRTPLTWELRSGIALGAARAVEYLHSQGPNVSHGNIKSSNILLTKNYEARVSDFGLAQLVSPSSTPNRIAGYRAPEVTDPRRVSHKADVYSFGVVLLELLTGKAPTHALLHEEGVDLPRWVQSVVREEWTSEVFDAELLSHQTVEEDMVELLQLAVDCTAPYPDNRPSIAEVRHRIEELRGSKDLKQTQHQHDLISVVDDLS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03562 643 FunFam pollen receptor-like kinase 1 319 425 - -
Arst5g03562 643 PANTHER OS05G0588300 PROTEIN 8 625 - -
Arst5g03562 643 FunFam Probable inactive receptor kinase At1g48480 426 629 - -
Arst5g03562 643 Gene3D Phosphorylase Kinase; domain 1 315 425 - -
Arst5g03562 643 SUPERFAMILY L domain-like 39 211 - -
Arst5g03562 643 SUPERFAMILY Protein kinase-like (PK-like) 355 617 IPR011009 -
Arst5g03562 643 CDD STKc_IRAK 357 620 - -
Arst5g03562 643 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Arst5g03562 643 FunFam Probable inactive receptor kinase RLK902 23 173 - -
Arst5g03562 643 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Arst5g03562 643 Gene3D Transferase(Phosphotransferase) domain 1 426 642 - -
Arst5g03562 643 ProSiteProfiles Protein kinase domain profile. 351 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03562 643 Pfam Protein kinase domain 354 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03562 643 Gene3D Ribonuclease Inhibitor 137 225 IPR032675 -
Arst5g03562 643 Gene3D Ribonuclease Inhibitor 25 136 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03562 Arst-Chr5 94675550 94678790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03562 24 623 Receptor kinase-like Gene Family AT3G17840 61.022 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst5g03562 Pkinase 9.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03562 - - gmx:100781597 793.497