Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03559 ATGGAGAGAGATTTTTTTGGTTTGAGCTCCAAAAGTGATGCAGGGACTACTATCAAAGACGATGCAGCAGTGAGGGGTTCAGGAATGCAGTGGACATTCTCAAACAAAGTCTCAGCCATTCCTCAGTACTTGTCCTTCAAGACGACTCTGGAAGATCAGAGAAAGACAATTATGGATCCCCTAGCTTCATCTGGATATATGACCATATCAACTAAGGATGCTTATGACACTGACCAGAAACCATTGTTGAGTGTGGTCCAGAGGAATTTGTCCATCGGAAAGCAAGCCGGAAACAACATTGGAATGACAGTGTATCCACCGCTATGTTCTGGTTCACATTTAGCTAGCCAACAACAGGAATCAAGAATATTTTCACTTTCCAACCAAACAAATAAAGTAAGTCCTGTTCTTCAATCTAACCTTGCTACTACTACCGGACATAGCATGGTTGCTTCAGTCATAAAACCACAAGCACTCGGTTCCAAATCAACCAGCACACCTGTATCTGCTCTTCCATCTGCGAGTTCCATTGTTGGAACTACCGAATTAAGGAATTGTTCCAAGTCTTCTGGGACACCTACTCAGCTGACCATTTTCTATGCCGGTTCAGTATGTGTTTATGATGACATATCTCCTGAGAAGGCCCAGGCTATCATGTTACTTGCTGGAAATGGCTCTGCTCTAAATCAGAACAACACAGTTTCTACAACTAAATTGCAGCCAGCAATGTCTGTTCCCTCCAAAGATAATGGTTTCATTGTAGGCATGCCAATTCCTCTTCCATCGACTTCTCTCCTCGTTTCTCGTCCTGGAGGAGCGTTGGTGGCAGTAGGACCTTCGACTACCTCTACCAACAATTTGGAATCTCCTAATGTTGTTTCAATAAGATCTGCATCTCAAAAAATGGTTAACACAGTAGGGTTGCCTCAGGCACGCAAAGCATCGTTGGCTCGGTTCTTGGAGAAGCGAAAGGAAAGGGTTATGAGCACATCTCCCTACACTTTAAGCAAGAAATCTTCCCCTGAAAGCAGCAATCCTGGATCAGATACTATTAGTCTTTCCATGAACTCCTCCGGTTCCTGTTCGCTACCAGCCATTAACTAA 1104 0.4384 MERDFFGLSSKSDAGTTIKDDAAVRGSGMQWTFSNKVSAIPQYLSFKTTLEDQRKTIMDPLASSGYMTISTKDAYDTDQKPLLSVVQRNLSIGKQAGNNIGMTVYPPLCSGSHLASQQQESRIFSLSNQTNKVSPVLQSNLATTTGHSMVASVIKPQALGSKSTSTPVSALPSASSIVGTTELRNCSKSSGTPTQLTIFYAGSVCVYDDISPEKAQAIMLLAGNGSALNQNNTVSTTKLQPAMSVPSKDNGFIVGMPIPLPSTSLLVSRPGGALVAVGPSTTSTNNLESPNVVSIRSASQKMVNTVGLPQARKASLARFLEKRKERVMSTSPYTLSKKSSPESSNPGSDTISLSMNSSGSCSLPAIN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03559 367 ProSiteProfiles Tify domain profile. 189 224 IPR010399 -
Arst5g03559 367 Pfam tify domain 192 223 IPR010399 -
Arst5g03559 367 Pfam Jas motif 309 333 IPR018467 -
Arst5g03559 367 MobiDBLite consensus disorder prediction 328 367 - -
Arst5g03559 367 MobiDBLite consensus disorder prediction 329 367 - -
Arst5g03559 367 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 130 345 IPR040390 -
Arst5g03559 367 SMART tify_2 189 224 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03559 Arst-Chr5 94560987 94565861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03559 29 351 Tify Gene Family AT3G17860 40.469 7.95e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst5g03559 tify 3.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03559 K13464 - gmx:100807288 424.091