Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03558 ATGGCATCAAGGCCAAATAAGAAACTAGGCTCAAACAAGAACCTAGAGAGTTTATTAGACATGGATCAAGCAGGAGGAGTTGCGAAAAAATTGAATAATCAACTTAGACCACAGAACTCTGTTCCTGGAACAGGGCTAGAATTTAGTAACCTTTCTTATAGTGTCATAAAGAAGCAGAAGAAGGATGGGGTTTGGATGAAGAAGGAAGCATATCTTCTTCATGACATCTCCGGCCAGGCCAACAAAGGCGAAATCATGGCGATCATGGGGCCGAGTGGTGCTGGAAAATCCACCTTTCTTGATGCCTTGGCAGGGAGAATTGCTCAAGGGAGTCTTGAAGGATCAGTTAGAATTGATGGAAAACCAGTGACTACAAGTTACATGAAGATGGTCTCATCATATGTGATGCAAGATGATCAATTGTTCCCTATGTTGACAGTTTTTGAGACATTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCAGTTTCAAGGGAGGAAAAGAGGAAGAGGGTTTATGAGCTTCTTGATCAACTTGGCTTGCAGAGTGCAACACATACATATATTGGTGATGAAGGAAGAAGAGGAGTATCAGGAGGGGAGAGAAGAAGGGTGTCCATTGGCATAGACATAATTCATAAGCCATCCCTTTTGTTCCTTGATGAACCAACCTCAGGACTTGATTCAACAAGTGCCTACAGTGTTGTTGAAAAGGTTAAGGACATAGCAAGAGGAGGTAGCATTGTCCTCATGACCATACATCAACCTTCATTTAGAATTCAAATGCTCCTTGACAAGATCACGGTCTTAGCGAGGGGAAGGCTTGTATACATGGGAAAACCAGATTTACTGGGTGCATTCCTTTCTGGATTTGGAAGGACAGTACCAGATGGAGAGAACAGCATGGAGTACCTATTAGATGTCATCAAAGAATATGAGCAATCCACCATTGGACTTGACCCTCTTGTTCTTTACCAACGCGACGGCCTCAAACCAGATCAAGCCGCCAAAACACCTGTCCCAAGAACACCAAGAACAGCTTACACAAGGAAGAACAACCCTGCTGGTGCTTCAAAACACATGATTAGCCTAAAATCTCAAGGATTCACGGCCGGAACATCGGTTCCTGATTCCTCAAACTTCAGCTATGGCTATAATTATGAAGACGAAGGCGAAGATGATGATCAGAATTTTGACAATTCTCTTGAGAGGAGAAGTGCTACTACTGCTCAAACTCCAAGGACTATGGCCAGTGGTGTCCATCCCCGGTTGGCTTCGCAGTTTTACAAAGACTTCTCTGCCAAGGATTTCTCTGTTTGGCTCTACCACGGTGTGGTAGGGACACCTCGCCGCGCGCCCTCTTGGACGCCAGCTAGGACACCAGGTGTGACACCTATGTCAGCTTCTAGAAGTGTTATGACAAGCCAACAACAAGATCCTTATTATGCTCGCGCGAAAACACCTTCACTAGTTAGCCAATCCATGAACATCTATGCAACTTCATATCAAGAATTTGATATTGAAGAAGAAGTGCTTGATGAGCCAAGCCATGGATCAAAGTATGCAAATCCATGGCTTCGCGAGGTAGTCGTGCTCTCATGGAGGACAATGCTTAATGTTATTCGAACTCCAGAGCTATTCCTGTCCAGAGAGATTGTCCTAACTGTCATGGCACTTGTCCTCTCCTCTATCTTCAAGAATCTAAGCCACACAACTTGCTTAGACATCAATAGGCTCCTCAACTTCTACATCTTTGCAGTATGCTTAGTCTTCTTCTCTTCGAATGACGCCGTCCCTTCCTTCATCCTGGAGAGGTTTATCTTCATTAGGGAGACTTCTCACAACGCTTATCGCGCATCATCCTATGTCATTTCTTCCCTTCTTGTTTACCTCCCTTTCTTTGCCGTCCAGGGACTAACTTTCGCAGCCATAACAAAGTTTTTGCTCCATCTTAAAAGCAAACTCTTGTACTTTTGGCTAATCCTTTTTGCTTCTCTTATAACCACCAATGCATATGTGATGCTTGTGAGTGCTCTTGTTCCAAGTTACATCACAGGATACGCGGTTGTTATAGCAACAACCGCGCTGTTCTTCTTGACATGTGGCTTCTTCCTCAAGCGAACTCAGATACCAGTGTATTGGAGGTGGTTGCATTACATTTCTGCTATCAAATACCCTTTTGAAGCATTGCTGACGAACGAATTCGACAACAACAACTGCTACACAGGGAACCTAGCCGATCTGTCTCCGGGTCCAATGGGAGATTTAAAGTTTAGCCAACAACACAATTTCAGCAGTAACTGCATTTTGATTGGGAAGGATGTGTTGGAGACAATGGATATTCAGTTGGATAATGTATGGTATGATATCTTGATCCTGCTAGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTACTTGGTACTGAGATTTTACTCCAAGAATGAGAGAAAATGA 2454 0.4381 MASRPNKKLGSNKNLESLLDMDQAGGVAKKLNNQLRPQNSVPGTGLEFSNLSYSVIKKQKKDGVWMKKEAYLLHDISGQANKGEIMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSVSREEKRKRVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDKITVLARGRLVYMGKPDLLGAFLSGFGRTVPDGENSMEYLLDVIKEYEQSTIGLDPLVLYQRDGLKPDQAAKTPVPRTPRTAYTRKNNPAGASKHMISLKSQGFTAGTSVPDSSNFSYGYNYEDEGEDDDQNFDNSLERRSATTAQTPRTMASGVHPRLASQFYKDFSAKDFSVWLYHGVVGTPRRAPSWTPARTPGVTPMSASRSVMTSQQQDPYYARAKTPSLVSQSMNIYATSYQEFDIEEEVLDEPSHGSKYANPWLREVVVLSWRTMLNVIRTPELFLSREIVLTVMALVLSSIFKNLSHTTCLDINRLLNFYIFAVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLLVYLPFFAVQGLTFAAITKFLLHLKSKLLYFWLILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPVYWRWLHYISAIKYPFEALLTNEFDNNNCYTGNLADLSPGPMGDLKFSQQHNFSSNCILIGKDVLETMDIQLDNVWYDILILLAWGVLYRFFFYLVLRFYSKNERK 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03558 817 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 297 IPR003439 GO:0005524
Arst5g03558 817 Gene3D - 45 287 IPR027417 -
Arst5g03558 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 283 IPR027417 -
Arst5g03558 817 ProSitePatterns ABC transporters family signature. 197 211 IPR017871 GO:0005524|GO:0016887
Arst5g03558 817 Pfam ABC transporter 73 225 IPR003439 GO:0005524
Arst5g03558 817 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 31 804 - -
Arst5g03558 817 FunFam ABC transporter G family member 6 61 288 - -
Arst5g03558 817 MobiDBLite consensus disorder prediction 452 471 - -
Arst5g03558 817 MobiDBLite consensus disorder prediction 333 357 - -
Arst5g03558 817 Pfam ABC-2 type transporter 529 735 IPR013525 GO:0016020|GO:0140359
Arst5g03558 817 CDD ABCG_EPDR 46 279 - -
Arst5g03558 817 SMART AAA_5 82 282 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03558 Arst-Chr5 94557127 94560832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03558 83 284 Calmodulin-binding Proteins AT2G36910 25.837 6.62e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03558 K05681 - gmx:100819497 1256.51