Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03530 ATGTGGATGGTGGGTTACAATGAAGGTGGAGGTGGCGATCATCATCACCATCAGTTAAACATGGTTGTTGATCACCATCATCATCATCACCATCATCATCCATTCGGAGCTTCTGGAAGAAAGCTAAGGCCTCTCATGCCAAGACCAATGACTTCTCCTAACAACTCAACAACAACGACAACAACAACAACCAATAACAACAACAACAACAACAACAACCCATGCTTAAGCCTTGTTCATCATCAGGGCAACGATTTCTTCTCTCAATATCACAACCATTTATTGGGAGAGCAGAACAAGAGGGAAAATGGTAACAACAACAATAATGGTTCGGCACCGGTTGTGGTGAGTTCCCGGTGGAATCCAACGCCAGAGCAGCTGAGAGCGCTTGAGGAGCTGTACAGAAGAGGGACTCGGACGCCGTCGGCGGAGCAAATCCAACACATAACAGCGCAGCTGAGAAGGTTTGGGAAGATTGAGGGCAAGAATGTCTTTTACTGGTTTCAGAATCATAAGGCTAGGGAGAGGCAAAAGCGTCGCCGCCAGATGGAATCATCTGATACCAATAACAATAATCATCCACTTCAAAACAACAATCACCACCGTGATTTTGATTCTTCTTCTGAAAAGAAAGAACTGGCAGCAAGTAGGACAATGGTTGAAGTTGAACAGACCAAAAACTGGGCATCCTCTACAAACTGCACTACTCTTGCAGAGGAATCTGTTTCAATGGAAAGAGAGGGAGGAGCAGGAAAAGCAGGAGTGGCAGAGTGTAGAGCAGATGGATGGGTCCAATTCGAAGAAGGGGAATTACAACAAAGAAGGAACTTTATGGAAAGGAATGCCACGTGGCACATGATGATGCATCATCACTCCCCATGTGCTGCTGCTGCACCACCTGCACCTGCACCACCTGTCACACACCTCATAAATGCCCCTCCTCCTCCTCCTACTTCTTCTTCCTCTCTTCCTCTTCTTCTTCCTCTTCAACCATCAAAGCTCATTAATAATAATAATAATAATCTCAGCTTCTTTATTTCATCAGAAAACAATTACAACAACACCACTCTTCTCCACTTAACCACCACTCATAGCAATGAAGAAGATGATGATGTTCTTGTTGATAATAGTATTATTAACATTCATCATCATCATCATCAGAATGAAAATCAAACCCTTCAACTTTTCCCTCTAAGGAGCGGTGACGATCTTCATCATCACATTAACGGCAAAGGGACAGAGATATCAGCATCAAATGATGCCATCACCCCAAACCACCATCACTTCTTTGAGTTCCTTCCTTTGAAGAACAACTAA 1317 0.4381 MWMVGYNEGGGGDHHHHQLNMVVDHHHHHHHHHPFGASGRKLRPLMPRPMTSPNNSTTTTTTTTNNNNNNNNNPCLSLVHHQGNDFFSQYHNHLLGEQNKRENGNNNNNGSAPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSDTNNNNHPLQNNNHHRDFDSSSEKKELAASRTMVEVEQTKNWASSTNCTTLAEESVSMEREGGAGKAGVAECRADGWVQFEEGELQQRRNFMERNATWHMMMHHHSPCAAAAPPAPAPPVTHLINAPPPPPTSSSSLPLLLPLQPSKLINNNNNNLSFFISSENNYNNTTLLHLTTTHSNEEDDDVLVDNSIINIHHHHHQNENQTLQLFPLRSGDDLHHHINGKGTEISASNDAITPNHHHFFEFLPLKNN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03530 438 CDD homeodomain 119 179 IPR001356 GO:0003677
Arst5g03530 438 Gene3D - 116 178 - -
Arst5g03530 438 MobiDBLite consensus disorder prediction 198 217 - -
Arst5g03530 438 MobiDBLite consensus disorder prediction 49 72 - -
Arst5g03530 438 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 98 422 IPR044555 GO:0003700|GO:0099402
Arst5g03530 438 FunFam WUSCHEL-related homeobox 4 117 184 - -
Arst5g03530 438 SUPERFAMILY Homeodomain-like 118 183 IPR009057 -
Arst5g03530 438 MobiDBLite consensus disorder prediction 25 72 - -
Arst5g03530 438 ProSiteProfiles 'Homeobox' domain profile. 123 178 IPR001356 GO:0003677
Arst5g03530 438 SMART HOX_1 115 182 IPR001356 GO:0003677
Arst5g03530 438 Pfam Homeodomain 118 177 IPR001356 GO:0003677
Arst5g03530 438 MobiDBLite consensus disorder prediction 171 224 - -
Arst5g03530 438 MobiDBLite consensus disorder prediction 98 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03530 Arst-Chr5 94423220 94426412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03530 1 437 Wox Gene Family AT3G18010 34.537 3.28e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst5g03530 Homeodomain 1.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03530 - - adu:107490490 699.508