Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03528 ATGTGGATGGTGGGTTACAATGAAGGTGGAGGTGGCGATCATCATCACCATCAGTTAAACATGGTTGTTGATCACCATCATCATCATCACCATCATCATCCATTCGGAGCTTCTGGAAGAAAGCTAAGGCCTCTCATGCCAAGACCAATGACTTCTCCTAACAACTCAACAACAACGACAACAACAACAACCAATAACAACAACAACAACAACAACAACCCATGCTTAAGCCTTGTTCATCATCAGGGCAACGATTTCTTCTCTCAATATCACAACCATTTATCGACAGTGGGAGAGCAGAACAAGAGGGAAAATGGTAACAACAACAATAATGGTTCGGCACCGGTTGTGGTGAGTTCCCGGTGGAATCCAACGCCAGAGCAGCTGAGAGCGCTTGAGGAGCTGTACAGAAGAGGGACTCGGACGCCGTCGGCGGAGCAAATCCAACACATAACAGCGCAGCTGAGAAGGTTTGGGAAGATTGAGGGCAAGAATGTCTTTTACTGGTTTCAGAATCATAAGGCTAGGGAGAGGCAAAAGCGTCGCCGCCAGATGGAATCATCTGATACCAATAACAATAATCATCCACTTCAAAACAACAATCACCACCGTGATTTTGATTCTTCTTCTGAAAAGAAAGAACTGGCAGCAAGTAGGACAATGGTTGAAGTTGAACAGACCAAAAACTGGGCATCCTCTACAAACTGCACTACTCTTGCAGAGGAATCTGTTTCAATGGAAAGAGAGGGAGGAGCAGGAAAAGCAGGAGTGGCAGAGTGTAGAGCAGATGGATGGGTCCAATTCGAAGAAGGGGAATTACAACAAAGAAGGAACTTTATGGAAAGGAATGCCACGTGGCACATGATGATGCATCATCACTCCCCATGTGCTGCTGCTGCACCACCTGCACCTGCACCACCTGTCACACACCTCATAAATGCCCCTCCTCCTCCTCCTACTTCTTCTTCCTCTCTTCCTCTTCTTCTTCCTCTTCAACCATCAAAGCTCATTAATAATAATAATAATAATCTCAGCTTCTTTATTTCATCAGAAAACAATTACAACAACACCACTCTTCTCCACTTAACCACCACTCATAGCAATGAAGAAGATGATGATGTTCTTGTTGATAATAGTATTATTAACATTCATCATCATCATCATCAGAATGAAAATCAAACCCTTCAACTTTTCCCTCTAAGGAGCGGTGACGATCTTCATCATCACATTAACGGCAAAGGGACAGAGATATCAGCATCAAATGATGCCATCACCCCAAACCACCATCACTTCTTTGAGTTCCTTCCTTTGAAGAACAACTAA 1323 0.4392 MWMVGYNEGGGGDHHHHQLNMVVDHHHHHHHHHPFGASGRKLRPLMPRPMTSPNNSTTTTTTTTNNNNNNNNNPCLSLVHHQGNDFFSQYHNHLSTVGEQNKRENGNNNNNGSAPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSDTNNNNHPLQNNNHHRDFDSSSEKKELAASRTMVEVEQTKNWASSTNCTTLAEESVSMEREGGAGKAGVAECRADGWVQFEEGELQQRRNFMERNATWHMMMHHHSPCAAAAPPAPAPPVTHLINAPPPPPTSSSSLPLLLPLQPSKLINNNNNNLSFFISSENNYNNTTLLHLTTTHSNEEDDDVLVDNSIINIHHHHHQNENQTLQLFPLRSGDDLHHHINGKGTEISASNDAITPNHHHFFEFLPLKNN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03528 440 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 100 424 IPR044555 GO:0003700|GO:0099402
Arst5g03528 440 MobiDBLite consensus disorder prediction 49 72 - -
Arst5g03528 440 MobiDBLite consensus disorder prediction 173 226 - -
Arst5g03528 440 SUPERFAMILY Homeodomain-like 120 185 IPR009057 -
Arst5g03528 440 CDD homeodomain 121 181 IPR001356 GO:0003677
Arst5g03528 440 MobiDBLite consensus disorder prediction 25 72 - -
Arst5g03528 440 Gene3D - 118 180 - -
Arst5g03528 440 MobiDBLite consensus disorder prediction 99 120 - -
Arst5g03528 440 MobiDBLite consensus disorder prediction 200 219 - -
Arst5g03528 440 SMART HOX_1 117 184 IPR001356 GO:0003677
Arst5g03528 440 Pfam Homeodomain 120 179 IPR001356 GO:0003677
Arst5g03528 440 FunFam WUSCHEL-related homeobox 4 119 186 - -
Arst5g03528 440 ProSiteProfiles 'Homeobox' domain profile. 125 180 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03528 Arst-Chr5 94423220 94426412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03528 1 439 Wox Gene Family AT3G18010 34.157 4.48e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst5g03528 Homeodomain 1.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03528 - - adu:107490490 709.138