Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03462 ATGACTGAGGGAGATCAGGCCACAAGTCCAGGCCCTGAGAGAGACATTGCTAATGGTTCAACATCTTCCGTAATTGTTGAAGGTGGTGAAACATGCCCTGTTTATCATGATCGTACTAATTCCACAGATTTCATGACTGGAAATACTGAAATGCAGCACTCTGGTCTTGCTGAGAGTTCTAATCCAGATGCCAGCACTGTATCCAGGTTGCCACGGAGAAGATCAAGTTTCCCACCGTTAGCGCAGGCTCTTTTTGATGCCCTTAAGAAGAATAGGTCTCTTCAGAAGTTTATTAGAAGCAAGATGATTGAGATTGAAGCAAAAATTGAGGAAAACAAGCAACTTAGGAACAATGTTAAAATCCTTAAGGACTTCCAAGCTTCATGCATAAGAAGAACAGGGAGTGCTTTATCGCTAAAAAAGGATCCTCGTGTCCTGTTAATATCAGCACAAAAGAGTGATAGTAAAAGAAAATCTCCAATGTGTTTTGGCCCACCAGACAATCGTCATGTTGCTAATTATAAGATGGTTTTAGAAAGATTTCCGCGTTCATTGGATCGAAAAAAATGGTCAAATGAGGAAAAGGAAAATCTTATGAAGGGAATTAAGCAACAATTCCAAGAATCGTTGGTAATAGCAATGAGTTCTGAAGTTCCACATGGAGATGGAAATTACATGGATAGCATAATGGAATATACTAACCAAGTTGATATTACACCCGAAATTATGAAAAAATATTTACCCGATGTTAATTGGGATAAGTTAGCTTCTACTCATGTTCCTGGCCGTACTGGTGCTGAATGTGAATCAAGGTGGTTGAATTGTGAAGATCCCTTGATCAACCATGGACCATGGACTAGTGAAGAGGATAGGTTGCTTTTGCTTCTTGTCCAACAAATGGGAATTAGGAACTGGTTCGATATTTCCAAATCCTTGGGCACGAACAGGACTCCATTTCAATGCTTGGCTCGATTTCAAAGGAGCTTGAATCCTTCGATGCTAAATAGGGAATGGACTAAAGAAGAAGATGCTCAACTCTGTTCTGCTGTAGCTATTTATGGAGAGAGTAATTGGCAAGCTGTGGCTTCTGTTTTAGAAAGGCGGACAGGAACCCAATGCTCAAATAGATGGAAGAAATCACTTTTTCCCGAGAGAAAAGGGAGTTATACTCAAGAGGAGGACAAGCGCTTGACAGTGGCAGTCATGCTTTTTGGTCGGAAATGGAATCAAATAGCTAGGTTTGTTCCTGGTCGGACCCAATGTCAATGTAGGGACAGATACGTCAATAGTTTGAACCCTTCTTTGAAATGGGGTGGATGGACTGACGAAGAGGATTCAAGATTGCAAGCTGCAATTGCTAAGCATGGATTCTGCTGGTCTAAGGTTGCTGAAGATATGCCCCCTCGTACTGATTCTCAATGCCGGAAGAGATTTAAGGTGTTATTTCCTGATCAAGCTTATTTGCTTCAAGAAGCAAGAAAGAAGCAAAAGTCTTTGATTGCTGGTAACTTTGTTGATCGAGAATCTGAACGCCCAAACCTTACACTGAATGATTTCCTTCCCTTACCTACATTATCTCCTCTTCCTTGTGATGCTGATGATGAGAATCTCCCTAGGAAGAGAAAGAGGAAGTCAAGCAATGAACACAAGAAATTCAGGTCCAGAAGACCCGCAAAAAAGACACGAACAAATCACAATGATGGAAAGGATATTGATGAGTCCAAGATTTTTAATGGAGATGTCAATATTCCCAAAAGAACAAGGTCCAAGAAAAACTCAAGAAATACTTCAGTTCATGCTAAGGAAGCTGAGAATACAAAACAAAATGCTGAGATCCAGGCTTGTAGTGGGAAACTAAGTAGAATCAAGGGCGCCGAAACATCAAAGAACAAACTAAAGAATAAAATGTTGAAACCTGAAAGCTTGTCTACTGTTGTTGAGTGTTCTGGAAGTCAAAATGAGGACAACACAACTCTTTCTTCCTTTCTACACATGAAGTTAAATAAGAGAGGGTTGAAATGCAACAAAAATAAGGGCGGGGCTGCCTCTGCATTTGCGACAAATGTTGTATCTAAGCAGGTTGATAATCAAAGCTCCTCTGCTGAGCAAGATGGCTTGTCGCAGTTGTGTGGTGCTGGTGGGGTTGAACATTTGGTTACGGTGCAAAACAACTCCGCTTCTGACAGGCTACTGAGAAAACCAGAGAATGTAAATAGGTTGACTGGTGATGAGGATGACAACGAAGATATCACCCTTGATTGCCTTGTGGGAAACAAATCAAAAGAATGTAGTCAAGTGACTAAAGGACCTTCTGTTTTATCTTCTTCCAAATCAAAACATGCGTCTGTTTCGCTTCCTGAAGTGCATTGCACAGAAAAGGCAGCCATCACAGCTGATTGCACCGGGCAGTCGACACCAAATCTTGTTGAAGACCGATCCGTTTCACCTAGTAGTTTGGCTGAACCTACGACAGCCTTCAATGCAGAGGAAGAAGATGAACTGCTTGCTACCTTTATGCGAAATAAGTCTAAGGGAGCACGAAGAAAGGTGAAACGTAAAGAAGGTAATTGCTAA 2574 0.413 MTEGDQATSPGPERDIANGSTSSVIVEGGETCPVYHDRTNSTDFMTGNTEMQHSGLAESSNPDASTVSRLPRRRSSFPPLAQALFDALKKNRSLQKFIRSKMIEIEAKIEENKQLRNNVKILKDFQASCIRRTGSALSLKKDPRVLLISAQKSDSKRKSPMCFGPPDNRHVANYKMVLERFPRSLDRKKWSNEEKENLMKGIKQQFQESLVIAMSSEVPHGDGNYMDSIMEYTNQVDITPEIMKKYLPDVNWDKLASTHVPGRTGAECESRWLNCEDPLINHGPWTSEEDRLLLLLVQQMGIRNWFDISKSLGTNRTPFQCLARFQRSLNPSMLNREWTKEEDAQLCSAVAIYGESNWQAVASVLERRTGTQCSNRWKKSLFPERKGSYTQEEDKRLTVAVMLFGRKWNQIARFVPGRTQCQCRDRYVNSLNPSLKWGGWTDEEDSRLQAAIAKHGFCWSKVAEDMPPRTDSQCRKRFKVLFPDQAYLLQEARKKQKSLIAGNFVDRESERPNLTLNDFLPLPTLSPLPCDADDENLPRKRKRKSSNEHKKFRSRRPAKKTRTNHNDGKDIDESKIFNGDVNIPKRTRSKKNSRNTSVHAKEAENTKQNAEIQACSGKLSRIKGAETSKNKLKNKMLKPESLSTVVECSGSQNEDNTTLSSFLHMKLNKRGLKCNKNKGGAASAFATNVVSKQVDNQSSSAEQDGLSQLCGAGGVEHLVTVQNNSASDRLLRKPENVNRLTGDEDDNEDITLDCLVGNKSKECSQVTKGPSVLSSSKSKHASVSLPEVHCTEKAAITADCTGQSTPNLVEDRSVSPSSLAEPTTAFNAEEEDELLATFMRNKSKGARRKVKRKEGNC 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03462 857 MobiDBLite consensus disorder prediction 527 612 - -
Arst5g03462 857 MobiDBLite consensus disorder prediction 543 560 - -
Arst5g03462 857 MobiDBLite consensus disorder prediction 803 824 - -
Arst5g03462 857 ProSiteProfiles Myb-like domain profile. 182 274 IPR001005 -
Arst5g03462 857 ProSiteProfiles Myb-like domain profile. 385 431 IPR001005 -
Arst5g03462 857 ProSiteProfiles Myb-like domain profile. 432 482 IPR001005 -
Arst5g03462 857 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 386 426 IPR017930 -
Arst5g03462 857 CDD SANT 388 431 IPR001005 -
Arst5g03462 857 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 277 333 IPR017930 -
Arst5g03462 857 Coils Coil 98 118 - -
Arst5g03462 857 Pfam Myb-like DNA-binding domain 439 481 IPR001005 -
Arst5g03462 857 Pfam Myb-like DNA-binding domain 187 274 IPR001005 -
Arst5g03462 857 Pfam Myb-like DNA-binding domain 386 429 IPR001005 -
Arst5g03462 857 SUPERFAMILY Homeodomain-like 257 326 IPR009057 -
Arst5g03462 857 CDD SANT 337 381 IPR001005 -
Arst5g03462 857 Gene3D - 186 278 - -
Arst5g03462 857 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 432 486 IPR017930 -
Arst5g03462 857 MobiDBLite consensus disorder prediction 1 72 - -
Arst5g03462 857 Pfam Myb-like DNA-binding domain 285 346 - -
Arst5g03462 857 MobiDBLite consensus disorder prediction 35 72 - -
Arst5g03462 857 SUPERFAMILY Homeodomain-like 411 484 IPR009057 -
Arst5g03462 857 ProSiteProfiles Myb-like domain profile. 330 381 IPR001005 -
Arst5g03462 857 MobiDBLite consensus disorder prediction 1 27 - -
Arst5g03462 857 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 59 799 - -
Arst5g03462 857 MobiDBLite consensus disorder prediction 803 832 - -
Arst5g03462 857 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 338 385 IPR017930 -
Arst5g03462 857 SUPERFAMILY Homeodomain-like 332 427 IPR009057 -
Arst5g03462 857 CDD SANT 440 482 IPR001005 -
Arst5g03462 857 Gene3D - 383 437 - -
Arst5g03462 857 MobiDBLite consensus disorder prediction 561 576 - -
Arst5g03462 857 CDD SANT 284 329 IPR001005 -
Arst5g03462 857 ProSiteProfiles Myb-like domain profile. 277 329 IPR001005 -
Arst5g03462 857 CDD SANT 244 274 IPR001005 -
Arst5g03462 857 Gene3D - 438 481 - -
Arst5g03462 857 Gene3D - 329 380 - -
Arst5g03462 857 Gene3D - 279 328 - -
Arst5g03462 857 SMART sant 334 383 IPR001005 -
Arst5g03462 857 SMART sant 436 484 IPR001005 -
Arst5g03462 857 SMART sant 281 331 IPR001005 -
Arst5g03462 857 SMART sant 385 433 IPR001005 -
Arst5g03462 857 SMART sant 186 278 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03462 Arst-Chr5 93500628 93506218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03462 62 529 MYB-Related Transcription Factor Family AT3G18100 52.546 4.22e-176 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst5g03462 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03462 K09422 - gmx:100818474 833.172