Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03455 ATGGATATCGAGGAGGACATTCGTTCTTTACAGCTTGATTCTGCGGAAGAGACTAATGGATCAGTAACGCCAGAGGATGTGAAGCCAGAAGTTGATAAATCTGAACATATGGATGAAGATCCAAAACCAGAAGTTCAAGCAGAACCTATCGATGTTGAACCAAAAGCAAAAGAGAAGGAAATTCCTCCTACACAGGACGAAGATGATGAGGCGGAGATGATGAAAAAAAGGCACTTAAATGTTGTGTTTATTGGTCATGTAGATGCTGGTAAATCTACAACAGGAGGTCAGATATTGTTTCTAAGTGGCCAGGTTGATGAAAGAACTATCCAAAAATATGAGAAAGAAGCTAAAGACAAAAGTAGAGAAAGCTGGTATATGGCTTATATTATGGACACAAACGAGGAGGAGAGAGTAAAGGTATGAATATATAATTATGTGAATGCGGTAATCTGGATATATTTGTCAGAGACAACAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGTTATGTACCTAACATGATCAGTGGTGCATCTCAGGCTGATATTGGAGTGTTGGTAATTTCAGCTCGAAAGGGAGAATTTGAAACAGGATACGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTCGCAAAAACGCTGGGGGTGGCTAAATTGCTTGTTGTTGTCAATAAAATGGATGAGCCGACTGTGGAATGGTCGAAAGAAAGGTATGATGAAATTGAGTCCAAAATGACACCATTTCTAAGACAATCAGGATACAATGTGAAAAAAGATGTCATTTTTCTACCAATATCTGGGTTGGTCGGTACAAATATGAAGACAAGAGTGGATAAAAAAATCTGCCCATGGTGGAATGGCCCATGCTTATTTGAAGCACTTGACGCTGTTGAAGTTCCTGAGCGAGACCCCAAAGGCCCCTTTAGGATGCCTATAATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGAAAAGTGGAATCTGGTACCGTTCGTGAGGGAGATTCCTTGTTGGTTATGCCAAATAAGGCTCAAGTAAAAGTTGTTGCTATATTTATTGATGAGGATAAGGTAAAACGTGCTGGACCTGGTGAAAATTTAAGGATTAGATTATCTGGTGTTGAAGAAGACGACATATCAAGTGGGTTTGTCCTATCAAGTGTTGCAAATTCAATACCAGCTGTTACTGAGTTTGTTGCTCAATTGGCAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCGGGGTATAAGGCTGTTTTGCATATCCACTCTGTTGTTGAAGAATGTGAGATTATTGAGCTCTTACATCAAATTGATCCAAAAACAAGGAAGCCTATGAAAAAAAAGGTCCTCTTCGTGAAGAACGGGGCTAATGTTGTGTGCCGAATTCAGGTTAATAGCATGATATGCATTGAGAAGTTCTCTGATTTTCCACAGCTTGGGAGATTTACTCTTCGCAGTGAAGGGAAAACTGTTGCAGTGGGGAAGGTTACTGCTCTGTAA 1518 0.4005 MDIEEDIRSLQLDSAEETNGSVTPEDVKPEVDKSEHMDEDPKPEVQAEPIDVEPKAKEKEIPPTQDEDDEAEMMKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKVXIYNYVNAVIWIYLSETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVAKLLVVVNKMDEPTVEWSKERYDEIESKMTPFLRQSGYNVKKDVIFLPISGLVGTNMKTRVDKKICPWWNGPCLFEALDAVEVPERDPKGPFRMPIIDKFKDMGTVVMGKVESGTVREGDSLLVMPNKAQVKVVAIFIDEDKVKRAGPGENLRIRLSGVEEDDISSGFVLSSVANSIPAVTEFVAQLAILELLDNAIFTAGYKAVLHIHSVVEECEIIELLHQIDPKTRKPMKKKVLFVKNGANVVCRIQVNSMICIEKFSDFPQLGRFTLRSEGKTVAVGKVTAL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03455 505 FunFam Putative translation elongation/initiation factor family protein 397 505 - -
Arst5g03455 505 PANTHER TRANSLATION FACTOR 68 504 - -
Arst5g03455 505 Pfam Elongation factor Tu GTP binding domain 76 285 IPR000795 GO:0003924|GO:0005525
Arst5g03455 505 Gene3D Translation factors 398 505 - -
Arst5g03455 505 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 400 504 IPR009001 -
Arst5g03455 505 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 56 303 - -
Arst5g03455 505 Gene3D Translation factors 308 393 - -
Arst5g03455 505 CDD EF1_alpha 80 304 - -
Arst5g03455 505 MobiDBLite consensus disorder prediction 1 73 - -
Arst5g03455 505 CDD eRF3_C_III 397 505 - -
Arst5g03455 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 314 IPR027417 -
Arst5g03455 505 PRINTS GTP-binding elongation factor signature 162 172 IPR000795 GO:0003924|GO:0005525
Arst5g03455 505 PRINTS GTP-binding elongation factor signature 222 231 IPR000795 GO:0003924|GO:0005525
Arst5g03455 505 PRINTS GTP-binding elongation factor signature 80 93 IPR000795 GO:0003924|GO:0005525
Arst5g03455 505 PRINTS GTP-binding elongation factor signature 178 189 IPR000795 GO:0003924|GO:0005525
Arst5g03455 505 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 76 308 IPR000795 GO:0003924|GO:0005525
Arst5g03455 505 CDD eRF3_II 310 391 - -
Arst5g03455 505 Gene3D - 58 304 IPR027417 -
Arst5g03455 505 MobiDBLite consensus disorder prediction 26 73 - -
Arst5g03455 505 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 307 393 - -
Arst5g03455 505 SUPERFAMILY Translation proteins 302 394 IPR009000 -
Arst5g03455 505 Pfam Elongation factor Tu C-terminal domain 396 504 IPR004160 -
Arst5g03455 505 Pfam Elongation factor Tu domain 2 323 389 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03455 Arst-Chr5 93393368 93400482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03455 76 505 Eukaryotic Initiation Factors Gene Family AT5G60390 36.468 3.15e-91 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03455 K03267 - gmx:100793653 855.514