Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03452 ATGGCAGAGCTGGATCCATCCAAGAAAGTAGCTGATAGGTATCTCAAGCGTGAGGTTCTTGGTGAAGGTACCTATGGAGTCGTTTACAAAGCCATTGATACACAGACGGGACAGACGGTTGCGATTAAGAAGATTCGGCTTGGTAAGCAGAAAGAAGGGGTGAATTTTACAGCACTTCGAGAAATAAAATTGCTCAAAGAGCTCAAAGATCCAAATATTATTGAGTTGATTGATGCATTCCCACACAAAGGGAACTTGCATCTTGTGTTTGAGTTCATGGAGACTGACCTTGAAGCTGTGATACGGGACAGAAATATTTTTCTTTCGCCGGGGGATATAAAATCTTACCTTCAGATGACACTAAAAGGTCTTGCAGTTTGCCACAAGAAATGGGTTTTGCATAGGGATATGAAACCAAATAACTTGTTGATAGGGTCTAATGGACAGCTAAAACTTGCAGATTTTGGTTTAGCACGGATATTTGGAAGCCCAGATCGCAGGTTCACACATCAGGTATTTGCTCGGTGGTACAGAGCACCTGAGTTATTATTTGGTACCAAGCAGTACGGGGCAGGGGTAGATGTTTGGGCTGCAGCTTGTATTTTTGCTGAACTACTTCTTCGTCGTCCCTTCCTCCAGGGTTCAAGTGATATTGATCAATTAGGGAAGATTTTTGCAGCATTTGGAACCCCATCACCTGCTCAGTGGCCTGATATGGTATATCTTCCTGACTATGTTGAATACCAACATGTTCCTGCTCCACCTTTGCGTTCTTTATTTCCAATGGCAAGTGATGATGCTTTAGATTTGTTGTCAAAGATGTTTACATATGATCCGAATGCTAGAATTTCAGTGCAGCAGGCACTAGAGCACAGGTATGTATCCAGAGAAGCTCTGCCTACAGTTCCAGAGAAGCTTCCAAGACCTGCCCCTAAGAAGGAATCTAAAGCTTCAGATGTCGATTCACAGGATGGTCCTACTGTGTTATCACCTCCAAGAAAGTCGAGGAGAATTATGCCGGGGCGTGATGGATTTGAAGCAAATTCTTTGCAGGAAGATAAGTTTGATGACAATGCCGGTAATTTCCGGCAAACAGTAGCTGATAATACAGGAAAGAATGGGCCAGCACCGATGTCACTAGATTTTTCTCTCTTCGGATTAAAACCTCCTAATAGACCTACAATTACAAGCGCTGACAGATCGCATTTAAAAAGAAAATTAGATTTGGAATTCAGCAACCAGAATGACTAA 1251 0.4261 MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKSYLQMTLKGLAVCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGAGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSPAQWPDMVYLPDYVEYQHVPAPPLRSLFPMASDDALDLLSKMFTYDPNARISVQQALEHRYVSREALPTVPEKLPRPAPKKESKASDVDSQDGPTVLSPPRKSRRIMPGRDGFEANSLQEDKFDDNAGNFRQTVADNTGKNGPAPMSLDFSLFGLKPPNRPTITSADRSHLKRKLDLEFSNQND 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03452 416 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03452 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Arst5g03452 416 PANTHER CELL DIVISION PROTEIN KINASE 12 300 - -
Arst5g03452 416 FunFam Putative cyclin-dependent kinase 7 95 310 - -
Arst5g03452 416 MobiDBLite consensus disorder prediction 336 359 - -
Arst5g03452 416 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03452 416 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Arst5g03452 416 Gene3D Phosphorylase Kinase; domain 1 5 94 - -
Arst5g03452 416 FunFam Cyclin-dependent kinase D-1 5 94 - -
Arst5g03452 416 CDD STKc_CDK7 13 307 IPR037770 GO:0005675|GO:0008353|GO:0070985
Arst5g03452 416 MobiDBLite consensus disorder prediction 300 402 - -
Arst5g03452 416 SUPERFAMILY Protein kinase-like (PK-like) 10 298 IPR011009 -
Arst5g03452 416 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03452 416 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03452 Arst-Chr5 93367105 93371427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03452 4 411 Core Cell Cycle Gene Families AT1G73690 73.284 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Arst5g03452 Pkinase 2.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03452 K02202 - gmx:100814263 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03452 5 93367105 93371427 Arst5g03452 5 93367105 93371427 ECH