Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03440 ATGTGCTTTCACCCAAGACTTAGGTGGAGGATTCCAGTTAAATACGTGGCTAAGCTTGAAGATGGGACGGTTGTTTTGAAATCTGATGGGGTGGAGTTCACCGTGGAAGAAGGTTATTTCTGTCCTGCATTGGCCAAGGCTGTGATGACAATGAAGAAGGGAGAGAAAGTCATCCTGACCGCGAAGCCAGAATATGCGTTCGGTGAGAATGGAAGGCCAGCATCAGGTGATGAAGGTGCCGTGCCTTGGAATGCTTCTCTGCAAATTGATCTCGAGTTGGTATCTTGGAAGGCTGTATCTGACATAACCAAGGATAAGAAGGTTCTCAAGAAGACCCTGAAGGAGGGAGAGGGATATGAATGTCCCAATGATGGAGCTGTGGTTCAAGTGAAACTTATTGGTAAGGTGCAAGATGGGACTGTTTTCGTGAAGAAGGGTCATGATGATGAGCAGCCATTTGAGTTCAAAATTGACGAGGAGCAAGTGATTGATGGACTTGATAAGGCTGTAATGAACATGAAGAAAGCGGAAGTTGCGTTGGTGACCATACATCCTGAATACGCTTTTGGCTCATCTGGGTCAACTCAGAAGAGTACATTAGTGCAATCCATTCTCAAGTAG 621 0.4573 MCFHPRLRWRIPVKYVAKLEDGTVVLKSDGVEFTVEEGYFCPALAKAVMTMKKGEKVILTAKPEYAFGENGRPASGDEGAVPWNASLQIDLELVSWKAVSDITKDKKVLKKTLKEGEGYECPNDGAVVQVKLIGKVQDGTVFVKKGHDDEQPFEFKIDEEQVIDGLDKAVMNMKKAEVALVTIHPEYAFGSSGSTQKSTLVQSILK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03440 206 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 8 97 IPR001179 GO:0003755
Arst5g03440 206 FunFam Peptidylprolyl isomerase 98 204 - -
Arst5g03440 206 Gene3D - 98 204 IPR046357 GO:0003755
Arst5g03440 206 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 125 206 IPR001179 GO:0003755
Arst5g03440 206 Gene3D - 4 97 IPR046357 GO:0003755
Arst5g03440 206 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 105 196 - -
Arst5g03440 206 SUPERFAMILY FKBP-like 100 195 - -
Arst5g03440 206 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 10 94 IPR001179 GO:0003755
Arst5g03440 206 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 120 197 IPR001179 GO:0003755
Arst5g03440 206 SUPERFAMILY FKBP-like 10 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03440 Arst-Chr5 93295506 93298644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03440 4 201 Calmodulin-binding Proteins AT3G25230 70.854 1.67e-93 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03440 K09571 - gmx:100819747 305.064