Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03425 ATGTTTTTTTCATATAACGACGCCGGAGGAACTCCCGTAAATTGGAAAACAAGGTCTGCCATTGCCCTTGGCGCTGCTCGTGGGGTCGCATGCCTACATTCACACGGACCAACATCCTCGTATGGAAACATCAAATCCTCAAATATCCTTCTCACCAAATCATTTGAAGCTCGTGTCTCCGACTTTGGCCTTGCTCATCTTGCTCTCCCGACCGCCACACCCAACCGTATTTCCGGCTATCGAGCCCCAGAGGTCACTGACTCTCGCAAAGTATCACAAAAGGCAGACGTCTACAGCTTTGGTATAATGCTCTTGGAGCAGACGTCTACAGCTTTGGTATACTGCTCTTGGAACTCCTAA 360 0.4917 MFFSYNDAGGTPVNWKTRSAIALGAARGVACLHSHGPTSSYGNIKSSNILLTKSFEARVSDFGLAHLALPTATPNRISGYRAPEVTDSRKVSQKADVYSFGIMLLEQTSTALVYCSWNS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03425 119 ProSiteProfiles Protein kinase domain profile. 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03425 119 Gene3D Transferase(Phosphotransferase) domain 1 3 118 - -
Arst5g03425 119 PANTHER OS01G0253100 PROTEIN 14 106 - -
Arst5g03425 119 Pfam Protein kinase domain 18 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03425 119 SUPERFAMILY Protein kinase-like (PK-like) 9 115 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03425 Arst-Chr5 93258740 93259099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03425 8 106 Receptor kinase-like Gene Family AT5G16590 67.677 9.36e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst5g03425 Pkinase 6.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03425 - - adu:107490517 242.276