LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g03381	ATGGAAATTGCCATCGATATTGCGAATGCATTGAGCTATCTTCACAAGCATGGCATCATCCACCATAACATAAACTCCAGCAATATTCTGCTAGATAAGAACATGTGTGCTAAAGTTGCTGGCTTGCACTTATCAAGGAAACTTCCAGAGGATGTTTCTGTCAATGCCACCAGCATTGTTTCAATTTCAAGTGGTATAGCAAAAAATTGTGTTTACATTGACCCAGAGTATGTGTCTCATGGCAGAGTCAGCACCAAGAATGATGTTTATAGCTTCGGAGTAGTGTTGTGCGATTTGATATCATCCAAGCTTGCTAAGTATTGGGAAGGTTGTGACCGAGAAAGTATTGCTGCACTTTTAGGCAGAAATATTGAAAATCAAGCTTTGGACAAGGTATTGGATCCAAGAACTGGCTTCCAATCAGACCATAAGATCATGCAGGTGATGACTGCAATGGCAGAGCTTGCACTTAATTGCATGGGATTTCCACAAGAACAAAGGCCAAATATGGAACAGGTGCTAGATATCCTCAATGGCAAGAGACTAGAGAGATATAAAACAATAGAAGCTTTCAGAATCTTTGACTATGCTGATCTCAGAAAAGCTACCATGCAATTTCATCCAGATAGGATCCTTGGAGAGGGAGGGTTCGGCAGCGTATTTTATGGAAAACTTCAAGATGGACTTGAAGTTGCAATAAAACGTTTCCACAACATGCGGGAAAATTCTCTTAAGCAATTCATGAATGAAATCGAGATCTTGAGACTCTTGCACCATAGAAACCTGGTTTCACTCTACGGCCGCAGCTCTGGTGAACATAACGAACTCTTTCTAGTCTATGAGTACGTCCCCAATGGCACTGTCTCTAGACATATTCATGGAGGTAAAATTGAAAAGCTACCATGGCTTACTAGATTGAATATTGCCATAGAAACTGCAACTGCATTGGCATATCTTCATGATTCAGGTATCATACACCGTGATGTAAAAGGAAGTAATATCCTCTTGGATGAAAATTTTTCTGTTAAAGTTGCAGATTTCGGACTCTCACGGTCCCAACCAGATTACGTTACTCATGTGTCAACAGCTCCAGCAGGGACAAATGCCTATATGGATCCGGAATATTTCCAAACAGGCAGGGTTTCCTATAGAAGTGATGTATATAGCTTTGGAGTGGTCTTGTTTGAGCTCATATCATCTAAACCTGCATTTTGGAGGGACGTCCCACACGGTGAGGCGGTTGGCCTCGCTAAGTTTGCAATCATCAAACTGTTAAATAACACATTGAAGGAGCTAGTAGATCCAGATATTGGGTATGATTCAGATAAAGATGTAACGGAAATGGTAGCAGCAGTGGCAGAGTTGGCCTTTCAGTGCATTCAGTGTCCTAAAGAGCTTAGACCTTCCATGAAACAGGTGCTGGAGACCCTTGAGGGTATAAAGAAGGGAACATGGGGATTCAACCAGATAACTTAG	1476	0.416	MEIAIDIANALSYLHKHGIIHHNINSSNILLDKNMCAKVAGLHLSRKLPEDVSVNATSIVSISSGIAKNCVYIDPEYVSHGRVSTKNDVYSFGVVLCDLISSKLAKYWEGCDRESIAALLGRNIENQALDKVLDPRTGFQSDHKIMQVMTAMAELALNCMGFPQEQRPNMEQVLDILNGKRLERYKTIEAFRIFDYADLRKATMQFHPDRILGEGGFGSVFYGKLQDGLEVAIKRFHNMRENSLKQFMNEIEILRLLHHRNLVSLYGRSSGEHNELFLVYEYVPNGTVSRHIHGGKIEKLPWLTRLNIAIETATALAYLHDSGIIHRDVKGSNILLDENFSVKVADFGLSRSQPDYVTHVSTAPAGTNAYMDPEYFQTGRVSYRSDVYSFGVVLFELISSKPAFWRDVPHGEAVGLAKFAIIKLLNNTLKELVDPDIGYDSDKDVTEMVAAVAELAFQCIQCPKELRPSMKQVLETLEGIKKGTWGFNQIT	491

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g03381	491	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	324	336	IPR008271	GO:0004672\|GO:0006468
	Arst5g03381	491	SMART	serkin_6	206	475	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g03381	491	ProSitePatterns	Protein kinases ATP-binding region signature.	212	234	IPR017441	GO:0005524
	Arst5g03381	491	Gene3D	Transferase(Phosphotransferase) domain 1	1	190	-	-
	Arst5g03381	491	Gene3D	Transferase(Phosphotransferase) domain 1	283	486	-	-
	Arst5g03381	491	Pfam	Protein tyrosine and serine/threonine kinase	2	176	IPR001245	GO:0004672\|GO:0006468
	Arst5g03381	491	CDD	STKc_IRAK	212	480	-	-
	Arst5g03381	491	Pfam	Protein kinase domain	207	475	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g03381	491	FunFam	Wall-associated receptor kinase 3	283	491	-	-
	Arst5g03381	491	ProSiteProfiles	Protein kinase domain profile.	1	188	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g03381	491	ProSiteProfiles	Protein kinase domain profile.	206	480	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g03381	491	SUPERFAMILY	Protein kinase-like (PK-like)	189	481	IPR011009	-
	Arst5g03381	491	Gene3D	Phosphorylase Kinase; domain 1	191	282	-	-
	Arst5g03381	491	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	188	484	IPR044652	GO:0004672
	Arst5g03381	491	SUPERFAMILY	Protein kinase-like (PK-like)	2	182	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g03381	Arst-Chr5	92415305	92418735	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst5g03381	193	481	Receptor kinase-like Gene Family	AT1G25390	56.314	7.51e-104	322

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Arst5g03381		Pkinase	4.1e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g03381	-		-	gmx:102666805	608.601