Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03380 ATGAGGTTGAGGTGTGATCTTCTTCAGTGCTGCTTCACTGGCACTTCTTCAAATGGTGTTATTCAGATAAAGGGGAAAATCTTCCCCTACTTGATACTTGCACAAGCAACAAATAATTTTAATAAACGTAATTGTCTTGGAAAGATAGGCTTGAAGAATCTATACTATGGCAAACTTAGAGATGGGTGTGAGATTGTAATTGAAAGAGTATCATCCAATGACAAGAGGCAAATATTTCAGCAGTTCCTCAATGAAATTTTGGTTTCGAATATCCTGGATCACAAAAATCTCGTGACATTTCGCGGTTATGCCTTTCATCATGAGGAATTCCTGGTAGCACATGAATATCTCTCCAATGGCACTCTTGCTGCTTATCTTGAATGTGAAATCCAACATAATAAATGCACATTACCTTTGCTTACTCGAATGGAAATTGCCATCGATATTGCGAATGCATTGAGCTATCTTCACAAGCATGGCATCATCCACCATAACATAAACTCCAGCAATATTCTGCTAGATAAGAACATGTGTGCTAAAGTTGCTGGCTTGCACTTATCAAGGAAACTTCCAGAGGATGTTTCTGTCAATGCCACCAGCATTGTTTCAATTTCAAGTGGTATAGCAAAAAATTGTGTTTACATTGACCCAGAGTATGTGTCTCATGGCAGAGTCAGCACCAAGAATGATGTTTATAGCTTCGGAGTAGTGTTGTGCGATTTGATATCATCCAAGCTTGCTAAGTATTGGGAAGGTTGTGACCGAGAAAGTATTGCTGCACTTTTAGGCAGAAATATTGAAAATCAAGCTTTGGACAAGGTATTGGATCCAAGAACTGGCTTCCAATCAGACCATAAGATCATGCAGGTGATGACTGCAATGGCAGAGCTTGCACTTAATTGCATGGGATTTCCACAAGAACAAAGGCCAAATATGGAACAGGTGCTAGATATCCTCAATGGCAAGAGACTAGAGAGATATAAAACAATAGAAGCTTTCAGAATCTTTGACTATGCTGATCTCAGAAAAGCTACCATGCAATTTCATCCAGATAGGATCCTTGGAGAGGGAGGGTTCGGCAGCGTATTTTATGGAAAACTTCAAGATGGACTTGAAGTTGCAATAAAACGTTTCCACAACATGCGGGAAAATTCTCTTAAGCAATTCATGAATGAAATCGAGATCTTGAGACTCTTGCACCATAGAAACCTGGTTTCACTCTACGGCCGCAGCTCTGGTGAACATAACGAACTCTTTCTAGTCTATGAGTACGTCCCCAATGGCACTGTCTCTAGACATATTCATGGAGATTTCGGACTCTCACGGTCCCAACCAGATTACGTTACTCATGTGTCAACAGCTCCAGCAGGGACAAATGCCTATATGGATCCGGAATATTTCCAAACAGGCAGGGTTTCCTATAGAAGTGATGTATATAGCTTTGGAGTGGTCTTGTTTGAGCTCATATCATCTAAACCTGCATTTTGGAGGGACGTCCCACACGGTGAGGCGGTTGGCCTCGCTAAGTTTGCAATCATCAAACTGTTAAATAACACATTGAAGGAGCTAGTAGATCCAGATATTGGGTATGATTCAGATAAAGATGTAACGGAAATGGTAGCAGCAGTGGCAGAGTTGGCCTTTCAGTGCATTCAGTGTCCTAAAGAGCTTAGACCTTCCATGAAACAGGTGCTGGAGACCCTTGAGGGTATAAAGAAGGGAACATGGGGATTCAACCAGATAACTTAG 1749 0.4122 MRLRCDLLQCCFTGTSSNGVIQIKGKIFPYLILAQATNNFNKRNCLGKIGLKNLYYGKLRDGCEIVIERVSSNDKRQIFQQFLNEILVSNILDHKNLVTFRGYAFHHEEFLVAHEYLSNGTLAAYLECEIQHNKCTLPLLTRMEIAIDIANALSYLHKHGIIHHNINSSNILLDKNMCAKVAGLHLSRKLPEDVSVNATSIVSISSGIAKNCVYIDPEYVSHGRVSTKNDVYSFGVVLCDLISSKLAKYWEGCDRESIAALLGRNIENQALDKVLDPRTGFQSDHKIMQVMTAMAELALNCMGFPQEQRPNMEQVLDILNGKRLERYKTIEAFRIFDYADLRKATMQFHPDRILGEGGFGSVFYGKLQDGLEVAIKRFHNMRENSLKQFMNEIEILRLLHHRNLVSLYGRSSGEHNELFLVYEYVPNGTVSRHIHGDFGLSRSQPDYVTHVSTAPAGTNAYMDPEYFQTGRVSYRSDVYSFGVVLFELISSKPAFWRDVPHGEAVGLAKFAIIKLLNNTLKELVDPDIGYDSDKDVTEMVAAVAELAFQCIQCPKELRPSMKQVLETLEGIKKGTWGFNQIT 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03380 582 SUPERFAMILY Protein kinase-like (PK-like) 18 322 IPR011009 -
Arst5g03380 582 Gene3D Phosphorylase Kinase; domain 1 15 116 - -
Arst5g03380 582 ProSiteProfiles Protein kinase domain profile. 348 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03380 582 Pfam Protein tyrosine and serine/threonine kinase 60 318 IPR001245 GO:0004672|GO:0006468
Arst5g03380 582 Pfam Protein tyrosine and serine/threonine kinase 351 434 IPR001245 GO:0004672|GO:0006468
Arst5g03380 582 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Arst5g03380 582 SUPERFAMILY Protein kinase-like (PK-like) 330 572 IPR011009 -
Arst5g03380 582 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 23 326 IPR044652 GO:0004672
Arst5g03380 582 Gene3D Transferase(Phosphotransferase) domain 1 117 332 - -
Arst5g03380 582 Gene3D Transferase(Phosphotransferase) domain 1 426 575 - -
Arst5g03380 582 Pfam Protein kinase domain 436 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03380 582 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Arst5g03380 582 ProSiteProfiles Protein kinase domain profile. 40 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03380 Arst-Chr5 92415305 92418735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03380 335 572 Receptor kinase-like Gene Family AT1G25390 44.710 4.87e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst5g03380 PK_Tyr_Ser-Thr 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03380 - - gsj:114418636 639.032