Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03378 ATGAGGTTGAGGTGTGATCTTCTTCAGTGCTGCTTCACTGGCACTTCTTCAAATGGTGTTATTCAGATAAAGGGGAAAATCTTCCCCTACTTGATACTTGCACAAGCAACAAATAATTTTAATAAACGTAATTGTCTTGGAAAGATAGGCTTGAAGAATCTATACTATGGCAAACTTAGAGATGGGTGTGAGATTGTAATTGAAAGAGTATCATCCAATGACAAGAGGCAAATATTTCAGCAGTTCCTCAATGAAATTTTGGTTTCGAATATCCTGGATCACAAAAATCTCGTGACATTTCGCGGTTATGCCTTTCATCATGAGGAATTCCTGGTAGCACATGAATATCTCTCCAATGGCACTCTTGCTGCTTATCTTGAATGTGAAATCCAACATAATAAATGCACATTACCTTTGCTTACTCGAATGGAAATTGCCATCGATATTGCGAATGCATTGAGCTATCTTCACAAGCATGGCATCATCCACCATAACATAAACTCCAGCAATATTCTGCTAGATAAGAACATGTGTGCTAAAGTTGCTGGCTTGCACTTATCAAGGAAACTTCCAGAGGATGTTTCTGTCAATGCCACCAGCATTGTTTCAATTTCAAGTGGTATAGCAAAAAATTGTGTTTACATTGACCCAGAGTATGTGTCTCATGGCAGAGTCAGCACCAAGAATGATGTTTATAGCTTCGGAGTAGTGTTGTGCGATTTGATATCATCCAAGCTTGCTAAGTATTGGGAAGGTTGTGACCGAGAAAGTATTGCTGCACTTTTAGGCAGAAATATTGAAAATCAAGCTTTGGACAAGGTATTGGATCCAAGAACTGGCTTCCAATCAGACCATAAGATCATGCAGGTGATGACTGCAATGGCAGAGCTTGCACTTAATTGCATGGGATTTCCACAAGAACAAAGGCCAAATATGGAACAGGTGCTAGATATCCTCAATGGCAAGAGACTAGAGAGATATAAAACAATAGAAGCTTTCAGAATCTTTGACTATGCTGATCTCAGAAAAGCTACCATGCAATTTCATCCAGATAGGATCCTTGGAGAGGGAGGGTTCGGCAGCGTATTTTATGGAAAACTTCAAGATGGACTTGAAGTTGCAATAAAACGTTTCCACAACATGCGGGAAAATTCTCTTAAGCAATTCATGAATGAAATCGAGATCTTGAGACTCTTGCACCATAGAAACCTGGTTTCACTCTACGGCCGCAGCTCTGGTGAACATAACGAACTCTTTCTAGTCTATGAGTACGTCCCCAATGGCACTGTCTCTAGACATATTCATGGAGGTAAAATTGAAAAGCTACCATGGCTTACTAGATTGAATATTGCCATAGAAACTGCAACTGCATTGGCATATCTTCATGATTCAGGTATCATACACCGTGATGTAAAAGGAAGTAATATCCTCTTGGATGAAAATTTTTCTGTTAAAGTTGCAGATTTCGGACTCTCACGGTCCCAACCAGATTACGTTACTCATGTGTCAACAGCTCCAGCAGGGACAAATGCCTATATGGATCCGGAATATTTCCAAACAGGCAGGGTTTCCTATAGAAGTGATGTATATAGCTTTGGAGTGGTCTTGTTTGAGCTCATATCATCTAAACCTGCATTTTGGAGGGACGTCCCACACGGTGAGGCGGTTGGCCTCGCTAAGTTTGCAATCATCAAACTGTTAAATAACACATTGAAGGAGCTAGTAGATCCAGATATTGGGTATGATTCAGATAAAGATGTAACGGAAATGGTAGCAGCAGTGGCAGAGTTGGCCTTTCAGTGCATTCAGTGTCCTAAAGAGCTTAGACCTTCCATGAAACAGGTGCTGGAGACCCTTGAGGGTATAAAGAAGGGAACATGGGGATTCAACCAGATAACTTAG 1902 0.4069 MRLRCDLLQCCFTGTSSNGVIQIKGKIFPYLILAQATNNFNKRNCLGKIGLKNLYYGKLRDGCEIVIERVSSNDKRQIFQQFLNEILVSNILDHKNLVTFRGYAFHHEEFLVAHEYLSNGTLAAYLECEIQHNKCTLPLLTRMEIAIDIANALSYLHKHGIIHHNINSSNILLDKNMCAKVAGLHLSRKLPEDVSVNATSIVSISSGIAKNCVYIDPEYVSHGRVSTKNDVYSFGVVLCDLISSKLAKYWEGCDRESIAALLGRNIENQALDKVLDPRTGFQSDHKIMQVMTAMAELALNCMGFPQEQRPNMEQVLDILNGKRLERYKTIEAFRIFDYADLRKATMQFHPDRILGEGGFGSVFYGKLQDGLEVAIKRFHNMRENSLKQFMNEIEILRLLHHRNLVSLYGRSSGEHNELFLVYEYVPNGTVSRHIHGGKIEKLPWLTRLNIAIETATALAYLHDSGIIHRDVKGSNILLDENFSVKVADFGLSRSQPDYVTHVSTAPAGTNAYMDPEYFQTGRVSYRSDVYSFGVVLFELISSKPAFWRDVPHGEAVGLAKFAIIKLLNNTLKELVDPDIGYDSDKDVTEMVAAVAELAFQCIQCPKELRPSMKQVLETLEGIKKGTWGFNQIT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03378 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Arst5g03378 633 Pfam Protein kinase domain 349 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03378 633 ProSiteProfiles Protein kinase domain profile. 348 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03378 633 Gene3D Phosphorylase Kinase; domain 1 15 116 - -
Arst5g03378 633 ProSiteProfiles Protein kinase domain profile. 40 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03378 633 SMART serkin_6 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03378 633 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03378 633 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Arst5g03378 633 CDD STKc_IRAK 354 622 - -
Arst5g03378 633 Gene3D Transferase(Phosphotransferase) domain 1 425 627 - -
Arst5g03378 633 Gene3D Transferase(Phosphotransferase) domain 1 117 332 - -
Arst5g03378 633 SUPERFAMILY Protein kinase-like (PK-like) 330 623 IPR011009 -
Arst5g03378 633 Pfam Protein tyrosine and serine/threonine kinase 60 318 IPR001245 GO:0004672|GO:0006468
Arst5g03378 633 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 332 626 IPR044652 GO:0004672
Arst5g03378 633 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Arst5g03378 633 SUPERFAMILY Protein kinase-like (PK-like) 18 322 IPR011009 -
Arst5g03378 633 FunFam Wall-associated receptor kinase 3 425 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03378 Arst-Chr5 92415305 92418735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03378 335 623 Receptor kinase-like Gene Family AT1G25390 56.314 1.27e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst5g03378 Pkinase 7.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03378 - - gsj:114418636 742.265