Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03377 ATGAGGTGTGTCCTGTTTAGCTGGTTTCAATGCTACACTACAAGGAAGAACCAACCTCAACAGATTTCAAACCACCCTCAACAATTTTCTTCAGATTTTGGGTTCCAATTTCATACATTCTCCTATGAAGAACTTTTAATAGCCACCAAGCATTTTGCTTCCTCCGGGATACTCGGAAAGGGAAGCTTTGGCATAGTATATCATGGTAAACTTCAAGATGGGAGACAGATTGCAGTCAAATCCTTGCGCGAAAACAATGACAAGAAAGTTCAACAGTTTGTCAATGAAATAGAAGTCTTAAGCAAATTGAGCCATCAAAACCTTGTCCCATTTTATGGCTACTGTCACCGCCATGACCATGAACTCATGCTAGTATTTGAATTTGTTTCCAATGGAACTCTGGCCGATCATCTTCATGGAAAGCGTAAGAAACAAGGCACTCTGGTACCCTGGCATACCAGATTGAACATAGCAATTGAGGCTGCAAGTGCATTGGCTTATCTTCATAATTCAGGAATTATTCACCGCGACATAAAATCCTCCAACATTCTTTTGGATGATAACTTGTGCGTTAAGGTAGCCGATTTTGGCCTTTCGCGCACGCTTCCTTTGGTTGTTTCAACCTCAAAAGAGGCTGCTACTTTTGCTTCTCATGCCTCAACTGCTCCACAAGGAACAAATGGATATATAGACCCTGACTATTTTCAATTTCACAGGGTTTGTGACAAGAGCGATACTTATAGCTTTGGCGTGGTTTTAGCCGAGATTATATCTTCGTTGCCAGCGGTTGATGATACATGGAATCCATATGAGGTACCATTACTGTCTCACCTTGCCATGAACAAAATCCAAAATGAAGCATTGCATGAGTTGGTGGATCCATGCCTTGGTTTTCAACCAGACAATGAGATTGGAGAATCTATAACTGCTGTGGCTGAGTTGGCATTTCAGTGCCTGCAATGTCCTAAGGAACTAAGGCCATCTATGAAGCAGGTGCTAGAGACTCTGCAGGGTATAAAGAAGGGAATATGGGGATTTCACCAAATAACATAG 1053 0.4188 MRCVLFSWFQCYTTRKNQPQQISNHPQQFSSDFGFQFHTFSYEELLIATKHFASSGILGKGSFGIVYHGKLQDGRQIAVKSLRENNDKKVQQFVNEIEVLSKLSHQNLVPFYGYCHRHDHELMLVFEFVSNGTLADHLHGKRKKQGTLVPWHTRLNIAIEAASALAYLHNSGIIHRDIKSSNILLDDNLCVKVADFGLSRTLPLVVSTSKEAATFASHASTAPQGTNGYIDPDYFQFHRVCDKSDTYSFGVVLAEIISSLPAVDDTWNPYEVPLLSHLAMNKIQNEALHELVDPCLGFQPDNEIGESITAVAELAFQCLQCPKELRPSMKQVLETLQGIKKGIWGFHQIT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03377 350 PIRSF ILK 36 348 - -
Arst5g03377 350 FunFam Somatic embryogenesis receptor kinase 1 21 128 - -
Arst5g03377 350 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Arst5g03377 350 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 342 IPR044652 GO:0004672
Arst5g03377 350 Pfam Protein tyrosine and serine/threonine kinase 57 336 IPR001245 GO:0004672|GO:0006468
Arst5g03377 350 SMART serkin_6 52 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03377 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Arst5g03377 350 ProSiteProfiles Protein kinase domain profile. 52 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03377 350 Gene3D Phosphorylase Kinase; domain 1 23 128 - -
Arst5g03377 350 Gene3D Transferase(Phosphotransferase) domain 1 129 343 - -
Arst5g03377 350 SUPERFAMILY Protein kinase-like (PK-like) 28 336 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03377 Arst-Chr5 92408401 92414695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03377 28 340 Receptor kinase-like Gene Family AT1G25390 53.674 1.52e-107 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst5g03377 PK_Tyr_Ser-Thr 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03377 - - adu:107490705 718.768