Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03375 ATGATCCATATCCGCTGGTTTCAATGCTACACTACAAGGAAGAACCAACCTCAACAGATTTCAAACCACCCTCAACAATTTTCTTCAGATTTTGGGTTCCAATTTCATACATTCTCCTATGAAGAACTTTTAATAGCCACCAAGCATTTTGCTTCCTCCGGGATACTCGGAAAGGGAAGCTTTGGCATAGTATATCATGGTAAACTTCAAGATGGGAGACAGATTGCAGTCAAATCCTTGCGCGAAAACAATGACAAGAAAGTTCAACAGTTTGTCAATGAAATAGAAGTCTTAAGCAAATTGAGCCATCAAAACCTTGTCCCATTTTATGGCTACTGTCACCGCCATGACCATGAACTCATGCTAGTATTTGAATTTGTTTCCAATGGAACTCTGGCCGATCATCTTCATGGAAAGCGTAAGAAACAAGGCACTCTGGTACCCTGGCATACCAGATTGAACATAGCAATTGAGGCTGCAAGTGCATTGGCTTATCTTCATAATTCAGGAATTATTCACCGCGACATAAAATCCTCCAACATTCTTTTGGATGATAACTTGTGCGTTAAGGTAGCCGATTTTGGCCTTTCGCGCACGCTTCCTTTGGTTGTTTCAACCTCAAAAGAGGCTGCTACTTTTGCTTCTCATGCCTCAACTGCTCCACAAGGAACAAATGGATATATAGACCCTGACTATTTTCAATTTCACAGGGTTTGTGACAAGAGCGATACTTATAGCTTTGGCGTGGTTTTAGCCGAGATTATATCTTCGTTGCCAGCGGTTGATGATACATGGAATCCATATGAGGTACCATTACTGTCTCACCTTGCCATGAACAAAATCCAAAATGAAGCATTGCATGAGTTGGTGGATCCATGCCTTGGTTTTCAACCAGACAATGAGATTGGAGAATCTATAACTGCTGTGGCTGAGTTGGCATTTCAGTGCCTGCAATGTCCTAAGGAACTAAGGCCATCTATGAAGCAGGTGCTAGAGACTCTGCAGGGTATAAAGAAGGGAATATGGGGATTTCACCAAATAACATAG 1047 0.4183 MIHIRWFQCYTTRKNQPQQISNHPQQFSSDFGFQFHTFSYEELLIATKHFASSGILGKGSFGIVYHGKLQDGRQIAVKSLRENNDKKVQQFVNEIEVLSKLSHQNLVPFYGYCHRHDHELMLVFEFVSNGTLADHLHGKRKKQGTLVPWHTRLNIAIEAASALAYLHNSGIIHRDIKSSNILLDDNLCVKVADFGLSRTLPLVVSTSKEAATFASHASTAPQGTNGYIDPDYFQFHRVCDKSDTYSFGVVLAEIISSLPAVDDTWNPYEVPLLSHLAMNKIQNEALHELVDPCLGFQPDNEIGESITAVAELAFQCLQCPKELRPSMKQVLETLQGIKKGIWGFHQIT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03375 348 SUPERFAMILY Protein kinase-like (PK-like) 26 334 IPR011009 -
Arst5g03375 348 ProSiteProfiles Protein kinase domain profile. 50 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03375 348 Gene3D Transferase(Phosphotransferase) domain 1 127 341 - -
Arst5g03375 348 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
Arst5g03375 348 SMART serkin_6 50 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03375 348 PIRSF ILK 34 346 - -
Arst5g03375 348 FunFam Somatic embryogenesis receptor kinase 1 19 126 - -
Arst5g03375 348 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 340 IPR044652 GO:0004672
Arst5g03375 348 Pfam Protein tyrosine and serine/threonine kinase 55 334 IPR001245 GO:0004672|GO:0006468
Arst5g03375 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Arst5g03375 348 Gene3D Phosphorylase Kinase; domain 1 21 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03375 Arst-Chr5 92408401 92414697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03375 26 338 Receptor kinase-like Gene Family AT1G25390 53.674 1.10e-107 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst5g03375 PK_Tyr_Ser-Thr 8.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03375 - - adu:107490705 704.516