Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03372 ATGTCACCAGCATCACAAGAAAAATACTGCTTTCCAACAAAGGGTAACCATGATATTGAAACTTTCTTAAAAAATCATGGAATTTTAACTATAAAAAGATACAAATTCTCTGATGTGAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGACAAGGTGGTTTTGGTGTTGTATACAAGGGAAAGTTATCCAATGATTTTGATGTAGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTGAAGAATTTATTAACGAGGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCGCCCTTCTTGGATTTTGCTTAGAAGGTCACAAGAAAGTTCTCATCTATGAATTTATGTCCAATGGTTCCCTTGACAATTTTATTTACAAAAAGAACCCTAAGAATACACCACTCTTGAGCTGGGATAATTTATATCAAATTTCCATAGGGATTGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACATTCTTATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAAAACTTTTGTCCTAAGATATCAGATTTTGGGCTAGCAAAACTTTGTCCTAGAAAAGAAAGTCATATTTCAGTGTCCGAAACTAGAGGAACAATAGGGTACATAGCTCCAGAAGTGTGGAGTAGACATCTCGGTAGAGTTTCACATAAATCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAACATCCTTGCAAAGACAAGTCACACAAGCGAGATGTACTTCCCTGATTGGATATACAAAAGGCTTGATCAAGGAACTCAACTGGGACCTGATGATGATGGGGAAGTGGCCATAGAGGAAGATGATGTTGTTAAGAAAATGACAATGGTGGGTTTATGGTGCATTCAACCAATTCCAAATGACAGACCAACAATGAGTAGAGTTGTAGAAATGTTGGAAGGCAGCATGAATTCCCTGGAAATGCCACCAAGACCTGTTCTGTCTTCAATAAGAGTGGCGGTAGAATCTTCTTCTAATGTTGTATCGTTGGTAGAATCTTCTTCTGTTGTATCAGTTGTAGAATCTTCTACTAGTGTAACTTAG 1104 0.365 MSPASQEKYCFPTKGNHDIETFLKNHGILTIKRYKFSDVKKMTNSFKVKLGQGGFGVVYKGKLSNDFDVAVKMLNPSKGNGEEFINEVASISRTSHVNVVALLGFCLEGHKKVLIYEFMSNGSLDNFIYKKNPKNTPLLSWDNLYQISIGIARGLEYLHRGCNILILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHISVSETRGTIGYIAPEVWSRHLGRVSHKSDVYSYGMMLLEMVGMKENILAKTSHTSEMYFPDWIYKRLDQGTQLGPDDDGEVAIEEDDVVKKMTMVGLWCIQPIPNDRPTMSRVVEMLEGSMNSLEMPPRPVLSSIRVAVESSSNVVSLVESSSVVSVVESSTSVT 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03372 367 SMART serkin_6 44 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03372 367 Gene3D Transferase(Phosphotransferase) domain 1 119 328 - -
Arst5g03372 367 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Arst5g03372 367 ProSiteProfiles Protein kinase domain profile. 44 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03372 367 PANTHER RUST RESISTANCE KINASE LR10-RELATED 17 341 IPR045874 GO:0004672
Arst5g03372 367 FunFam S-receptor-like serine/threonine-protein kinase 15 118 - -
Arst5g03372 367 Pfam Protein tyrosine and serine/threonine kinase 46 319 IPR001245 GO:0004672|GO:0006468
Arst5g03372 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Arst5g03372 367 FunFam PR5-like receptor kinase 119 330 - -
Arst5g03372 367 Gene3D Phosphorylase Kinase; domain 1 19 118 - -
Arst5g03372 367 SUPERFAMILY Protein kinase-like (PK-like) 27 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03372 Arst-Chr5 92376213 92378811 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03372 27 349 Receptor kinase-like Gene Family AT1G66910 57.231 3.03e-129 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst5g03372 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03372 - - adu:107490395 694.501