Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03368 ATGAAACATAGAACACTCTTATCCACCTTCAGTTTCTTTTATTCTTTTCCCCTTATTATTCGCTCGTACATAATAATCTTTTTCCTTCTTCTAACAAGAATCACTCTGTGTTCTGTGAATCCAAAGTTCCAAGCATGTGAGCCCAAAACTTGCGGTGGTGATACTAATCACCAAAACATAAGCTTTCCCTTCTACATCATATCAAAACAAAACTCCTACTGTGGTCTCCCTAATTTCGGACTCACTTGCTCTCACGATGGCTTCCCAATCGTCAATATCTCAGGAGCTCTATACGCTGTCCAAAACATTTTCTACAGCAACCAATCACTTCGAGTGTCCATCCCTGCGCTCTCGGGGCTAAGAACCACCGAATGTATTGCCCCAGTGAGAAACTTCACCGGCCGCAGCAAAAGGTTCATTGTTGCTTCGAAGCAGAAGCAAGTGTTGCTGTTGTATGGCTGTGAAAACATGCAAGAGCATAGTATTGGGTGTTCAGCTGAAAACAGAACGAGATCGGTTGTGGCGCTTTATGGGGATGACGTTGACAATTTGACGTTGGCGAGGAAGAATTACAGGGGGACAGTGAGCGTAACGTGGGTGGAAGATGAGAAAGGAGGGGTTGAAGAGGCGCTGAGAAGAGGGTTTTTGCTGAATTGGACGGCCGAAAATTGCAGCGAGTGCTCGAGCAGTGGTGGGAGGTGTGGGTTCGATGAAGAAGAATATACTTTCAGGTGCTATTGTCCTGATAGAATTGATTCAGAGAGGTGTTATTCACAACCAGGTAGTGGCTGGACCCGGCAAAAGAAGGTCATTATTGGTGCTACAGCAGCTGCAGTAATTGCAGGATTGTTGAGTATTTGTTATTTTATCTACATGTTACCAAGATGGCGAGAAAAATACTGCTTTTCAACAAAGGGTAACCAAGATATTGAAACTTTTTTAAAAAATCATGGAGTGTTAACTATAAAAAGATATAAATTTTCTGATGTGAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGACAAGGTGGTTTTGGTGTTGTATACAAGGGAAAGTTATCCGATGGTTCTAATGTGGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTAAAGAATTTATCAATGAGGTAGCTAGCATTAGTAGAACTTTTCATGTTAATGTTGTCACCCTTTTTGGATTCTGCTTTGAAGGCCGCAAGAAAGTTCTTATTTATGAATTTATATCAAATGGTTCCCTTGACAAGTATATTTATATAAAGGAAGGAGTTGAAACTACTACATTGTTGAGTTGGGATAAGCTGTATCAAATTGCCAAAGGGATAGCTAAGGGGTTAGAGTACTTACATAGAGGATGCAACACCCAAATTTTACATTTTGACATAAAGCCGCATAATATTCTTTTGGATGAAAATTTTTGTCCTAAAATTTCAGATTTTGGACTAGCAAAACTTTGTCTTGGGAAGGAAAGTCTTATTTCAGATTTTAGAGTACTTTATAGTTACGGAATGATGCTTCTTGATATAGTGGGAGGAAAGAAGAACATTAATGTAGAAGGGAGTCAAACAAGTGAGATATATTTCCCTGATTGGATATACAAGAAGCTTGAGCAACGCACTCAATTAGGACCTGAAGATGGAGTGGTGGCAATAGAGGAAAATGAATTGGTTAAGAAAATAACGATTGTGGGTTTATGGTGTATTCAAACAATTCCAAATGATAGACCTACAATGAGTAAAGTTGTCGAAATGTTAGAAGGCAGCATAGATTCCATAAAAATGCCACCAAGACCTGCTCTGTCTTCTCCTGTAAGATCAATTTCAGAATCTTCTACTTTGTTAAATTAG 1851 0.3922 MKHRTLLSTFSFFYSFPLIIRSYIIIFFLLLTRITLCSVNPKFQACEPKTCGGDTNHQNISFPFYIISKQNSYCGLPNFGLTCSHDGFPIVNISGALYAVQNIFYSNQSLRVSIPALSGLRTTECIAPVRNFTGRSKRFIVASKQKQVLLLYGCENMQEHSIGCSAENRTRSVVALYGDDVDNLTLARKNYRGTVSVTWVEDEKGGVEEALRRGFLLNWTAENCSECSSSGGRCGFDEEEYTFRCYCPDRIDSERCYSQPGSGWTRQKKVIIGATAAAVIAGLLSICYFIYMLPRWREKYCFSTKGNQDIETFLKNHGVLTIKRYKFSDVKKMTNSFKVKLGQGGFGVVYKGKLSDGSNVAVKMLNPSKGNGKEFINEVASISRTFHVNVVTLFGFCFEGRKKVLIYEFISNGSLDKYIYIKEGVETTTLLSWDKLYQIAKGIAKGLEYLHRGCNTQILHFDIKPHNILLDENFCPKISDFGLAKLCLGKESLISDFRVLYSYGMMLLDIVGGKKNINVEGSQTSEIYFPDWIYKKLEQRTQLGPEDGVVAIEENELVKKITIVGLWCIQTIPNDRPTMSKVVEMLEGSIDSIKMPPRPALSSPVRSISESSTLLN 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03368 616 Gene3D Transferase(Phosphotransferase) domain 1 497 600 - -
Arst5g03368 616 SMART serkin_6 335 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03368 616 FunFam S-receptor-like serine/threonine-protein kinase 305 409 - -
Arst5g03368 616 Pfam Wall-associated receptor kinase galacturonan-binding 46 113 IPR025287 GO:0030247
Arst5g03368 616 Gene3D Transferase(Phosphotransferase) domain 1 410 496 - -
Arst5g03368 616 MobiDBLite consensus disorder prediction 595 616 - -
Arst5g03368 616 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Arst5g03368 616 Gene3D Phosphorylase Kinase; domain 1 309 409 - -
Arst5g03368 616 SUPERFAMILY Protein kinase-like (PK-like) 317 587 IPR011009 -
Arst5g03368 616 FunFam Os07g0541700 protein 410 500 - -
Arst5g03368 616 Pfam Wall-associated receptor kinase C-terminal 201 249 IPR032872 -
Arst5g03368 616 ProSiteProfiles Protein kinase domain profile. 335 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03368 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Arst5g03368 616 Pfam Protein kinase domain 338 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03368 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 307 603 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03368 Arst-Chr5 92311018 92329334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03368 22 614 Receptor kinase-like Gene Family AT5G38260 34.317 5.84e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst5g03368 Pkinase 4.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03368 - - adu:107490347 1222.61