Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03367 ATGGGCTCACAACAATTCAGTGTGGAGAATGAGGATCCCCTAATTAACTATTACACGGTGAAATTGGTGCCCATTCCACGTGACGGAGAACCTGATCTTTGCTCTCTCAGTTTCGATTATTTTCTGAATGACACTCTATTCACCTATAACCAAACAGTGCACAACATCACCATATTCTATGATTGCAACTACTCCTCTATATATTCGGATAACCATAGCCTAGGGTGCGTTGGTAGCGGTGGTGGTGGTCATGTTGTGTATTATAATGGTACGGAAAAAGAGGTGCTGGCAAGTCATCAAGACCTCAAGAATTGCCGTCATCGTATCCAAGTAGCCGCTGAGGCTGTTTCCTTGAAGGGGGACGGAGGTGGTGAAGCTTCTGCTCTGTATTTCGGTAAAGGTGTGTCGGTGAACTACACTTATTCTCAAGATTGTAAGAGATGCGTGGACAGTGGAGGAAGTTGCGGGAGCAACGATACGCATCCATTTACCTGCTATTGCCCTGATGGATCTAACGACCTCCAATGTCCTCATCGTAACAGAAATCATTTGAGATGGATAGTTATAGTGGCTACTGTTGTGGTTGGAGTGCTAGCCCTTGCCATGGCCATGGCCATCTATTTCTATCAAAGGCGAAAGAAGACTACTTACGGAATGTCTTCTGATCGATCATCTTTCAAAGACACTGAGAAGAGAAGTCAATACTTTGGACCGCAGCTTCACTGTTCTCTTGTTGTCGCATGGCACTACGCTAGTTCAGGTGTAACAGTTGCAGTAATTACAGTTTTCAGACTGTTGGCTACTTGTTTAGCGCCAAAATCATTGAAGATAAAGAGTAACCAACAGATTGAGACCTTCTTGAAAAATCATGGAGTCTTAACTCTGAAGAGATATAAATTTTCGGATGTGAAGAAAATGACCAACTCTTTCAAAGATAAATTAGGACAAGGCGGTTTTGGTGCTGTATACAAGGGAAAGTTATCCAATGGTTTTGATGTGGCTGTCAAAATATTGAATCCATCCAAAGGAAATGGTGAAGAATTTATTAACGAGGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCACTCTTCTTGGATTTTGTTTTGAAGGTCATAAGAAAGTTCTCATCTATGAGTTTATGTCCAATGGTTCCCTTGACAATTTTATTTACAAAAAGGACCCTAAGAGTACTCCACTCTTGAGTTGGGATAATTTGTATCAAATTTCCATAGGGATTGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACATTCGAATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGACGAAAACTTTTGTCCCAAAATATCAGATTTTGGGCTAGCAAAGCTTTGTCCTAGAAAAGAAAGTCATATTTCAATGTCTGAAACTAGAGGAACAATAGGGTACATAGCTCCAGAAGTGTCAAATAGACATTTCGGTAGAGTTTCATATAAATCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAAGAACATAACTGCAGAACCAAGTCAATCAAGCGAGATGTACTTCCCTGATTGGATATACAAAAGGCTTGAGCAAGGCAGTCAATTAGGACCAGATGATGATGGGGAGGTGATCATAGAGGAAAATGATGTGGTTAAGAAAATGACAGTGGTAGGTTTATGGTGCATTCAACCAATTCCAGATGATAGACCAACAATGAGCAAAGTTGTAGAAATGTTGGAAGGCAGCATGAATTTCCTGGAATTGCCTCCTAGGCCTGTTCTGTCTTCTCAGATAAGGTTGGTGATAGAATCTTCTACTATTGTATCGTCATTGACAGAATCTTCTTCTATTGTAAGTTAA 1875 0.4 MGSQQFSVENEDPLINYYTVKLVPIPRDGEPDLCSLSFDYFLNDTLFTYNQTVHNITIFYDCNYSSIYSDNHSLGCVGSGGGGHVVYYNGTEKEVLASHQDLKNCRHRIQVAAEAVSLKGDGGGEASALYFGKGVSVNYTYSQDCKRCVDSGGSCGSNDTHPFTCYCPDGSNDLQCPHRNRNHLRWIVIVATVVVGVLALAMAMAIYFYQRRKKTTYGMSSDRSSFKDTEKRSQYFGPQLHCSLVVAWHYASSGVTVAVITVFRLLATCLAPKSLKIKSNQQIETFLKNHGVLTLKRYKFSDVKKMTNSFKDKLGQGGFGAVYKGKLSNGFDVAVKILNPSKGNGEEFINEVASISRTSHVNVVTLLGFCFEGHKKVLIYEFMSNGSLDNFIYKKDPKSTPLLSWDNLYQISIGIARGLEYLHRGCNIRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHISMSETRGTIGYIAPEVSNRHFGRVSYKSDVYSYGMMLLEMVGMKEKNITAEPSQSSEMYFPDWIYKRLEQGSQLGPDDDGEVIIEENDVVKKMTVVGLWCIQPIPDDRPTMSKVVEMLEGSMNFLELPPRPVLSSQIRLVIESSTIVSSLTESSSIVS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03367 624 FunFam serine/threonine-protein kinase PBS1-like 276 382 - -
Arst5g03367 624 Gene3D Transferase(Phosphotransferase) domain 1 383 591 - -
Arst5g03367 624 CDD STKc_IRAK 314 586 - -
Arst5g03367 624 FunFam PR5-like receptor kinase 383 595 - -
Arst5g03367 624 Pfam Protein tyrosine and serine/threonine kinase 310 584 IPR001245 GO:0004672|GO:0006468
Arst5g03367 624 Gene3D Phosphorylase Kinase; domain 1 269 382 - -
Arst5g03367 624 ProSiteProfiles Protein kinase domain profile. 308 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03367 624 PANTHER RUST RESISTANCE KINASE LR10-RELATED 279 602 IPR045874 GO:0004672
Arst5g03367 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Arst5g03367 624 SMART serkin_6 308 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03367 624 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Arst5g03367 624 Pfam Wall-associated receptor kinase C-terminal 91 170 IPR032872 -
Arst5g03367 624 SUPERFAMILY Protein kinase-like (PK-like) 290 585 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03367 Arst-Chr5 92303660 92307293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03367 251 622 Receptor kinase-like Gene Family AT1G66910 52.356 9.72e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst5g03367 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03367 - - ahf:112751085 854.358