Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03366 ATGGGCTCACAACAATTCAGTGTGGAGAATGAGGATCCCCTAATTAACTATTACACGGTGAAATTGGTGCCCATTCCACGTGACGGAGAACCTGATCTTTGCTCTCTCAGTTTCGATTATTTTCTGAATGACACTCTATTCACCTATAACCAAACAGTGCACAACATCACCATATTCTATGATTGCAACTACTCCTCTATATATTCGGATAACCATAGCCTAGGGTGCGTTGGTAGCGGTGGTGGTGGTCATGTTGTGTATTATAATGGTACGGAAAAAGAGGTGCTGGCAAGTCATCAAGACCTCAAGAATTGCCGTCATCGTATCCAAGTAGCCGCTGAGGCTGTTTCCTTGAAGGGGGACGGAGGTGGTGAAGCTTCTGCTCTGTATTTCGGTAAAGGTGTGTCGGTGAACTACACTTATTCTCAAGATTGTAAGAGATGCGTGGACAGTGGAGGAAGTTGCGGGAGCAACGATACGCATCCATTTACCTGCTATTGCCCTGATGGATCTAACGACCTCCAATGTCCTCATCGTAACAGAAATCATTTGAGATGGATAGTTATAGGTACAGTGGCTACTGTTGTGGTTGGAGTGCTAGCCCTTGCCATGGCCATGGCCATCTATTTCTATCAAAGGCGAAAGAAGACTACTTACGGAATGTCTTCTGATCGATCATCTTTCAAAGACACTGAGAAGAGAAGTCAATACTTTGGACCGCAGCTTCACTGTTCTCTTGTTGTCGCATGGCACTACGCTAGTTCAGGTGTAACAGTTGCAGTAATTACAGTTTTCAGACTGTTGGCTACTTGTTTAGCGCCAAAATCATTGAAGATAAAGAGTAACCAACAGATTGAGACCTTCTTGAAAAATCATGGAGTCTTAACTCTGAAGAGATATAAATTTTCGGATGTGAAGAAAATGACCAACTCTTTCAAAGATAAATTAGGACAAGGCGGTTTTGGTGCTGTATACAAGGGAAAGTTATCCAATGGTTTTGATGTGGCTGTCAAAATATTGAATCCATCCAAAGGAAATGGTGAAGAATTTATTAACGAGGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCACTCTTCTTGGATTTTGTTTTGAAGGTCATAAGAAAGTTCTCATCTATGAGTTTATGTCCAATGGTTCCCTTGACAATTTTATTTACAAAAAGGACCCTAAGAGTACTCCACTCTTGAGTTGGGATAATTTGTATCAAATTTCCATAGGGATTGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACATTCGAATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGACGAAAACTTTTGTCCCAAAATATCAGATTTTGGGCTAGCAAAGCTTTGTCCTAGAAAAGAAAGTCATATTTCAATGTCTGAAACTAGAGGAACAATAGGGTACATAGCTCCAGAAGTGTCAAATAGACATTTCGGTAGAGTTTCATATAAATCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAAGAACATAACTGCAGAACCAAGTCAATCAAGCGAGATGTACTTCCCTGATTGGATATACAAAAGGCTTGAGCAAGGCAGTCAATTAGGACCAGATGATGATGGGGAGGTGATCATAGAGGAAAATGATGTGGTTAAGAAAATGACAGTGGTAGGTTTATGGTGCATTCAACCAATTCCAGATGATAGACCAACAATGAGCAAAGTTGTAGAAATGTTGGAAGGCAGCATGAATTTCCTGGAATTGCCTCCTAGGCCTGTTCTGTCTTCTCAGATAAGGTTGGTGATAGAATCTTCTACTATTGTATCGTCATTGACAGAATCTTCTTCTATTGTAAGTTAA 1881 0.4003 MGSQQFSVENEDPLINYYTVKLVPIPRDGEPDLCSLSFDYFLNDTLFTYNQTVHNITIFYDCNYSSIYSDNHSLGCVGSGGGGHVVYYNGTEKEVLASHQDLKNCRHRIQVAAEAVSLKGDGGGEASALYFGKGVSVNYTYSQDCKRCVDSGGSCGSNDTHPFTCYCPDGSNDLQCPHRNRNHLRWIVIGTVATVVVGVLALAMAMAIYFYQRRKKTTYGMSSDRSSFKDTEKRSQYFGPQLHCSLVVAWHYASSGVTVAVITVFRLLATCLAPKSLKIKSNQQIETFLKNHGVLTLKRYKFSDVKKMTNSFKDKLGQGGFGAVYKGKLSNGFDVAVKILNPSKGNGEEFINEVASISRTSHVNVVTLLGFCFEGHKKVLIYEFMSNGSLDNFIYKKDPKSTPLLSWDNLYQISIGIARGLEYLHRGCNIRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHISMSETRGTIGYIAPEVSNRHFGRVSYKSDVYSYGMMLLEMVGMKEKNITAEPSQSSEMYFPDWIYKRLEQGSQLGPDDDGEVIIEENDVVKKMTVVGLWCIQPIPDDRPTMSKVVEMLEGSMNFLELPPRPVLSSQIRLVIESSTIVSSLTESSSIVS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03366 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Arst5g03366 626 Gene3D Transferase(Phosphotransferase) domain 1 385 593 - -
Arst5g03366 626 Gene3D Phosphorylase Kinase; domain 1 271 384 - -
Arst5g03366 626 FunFam serine/threonine-protein kinase PBS1-like 278 384 - -
Arst5g03366 626 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Arst5g03366 626 Pfam Wall-associated receptor kinase C-terminal 91 170 IPR032872 -
Arst5g03366 626 ProSiteProfiles Protein kinase domain profile. 310 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03366 626 FunFam PR5-like receptor kinase 385 597 - -
Arst5g03366 626 PANTHER RUST RESISTANCE KINASE LR10-RELATED 281 604 IPR045874 GO:0004672
Arst5g03366 626 CDD STKc_IRAK 316 588 - -
Arst5g03366 626 SMART serkin_6 310 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03366 626 Pfam Protein tyrosine and serine/threonine kinase 312 586 IPR001245 GO:0004672|GO:0006468
Arst5g03366 626 SUPERFAMILY Protein kinase-like (PK-like) 292 587 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03366 Arst-Chr5 92303660 92307293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03366 253 624 Receptor kinase-like Gene Family AT1G66910 52.356 9.09e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst5g03366 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03366 - - ahf:112751085 858.596