Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03362 ATGTCAAAAGCTTTCTACTTGTTATGTGCATTATTCTCCACCATATTCATGACATATTATGCTGATTCATTACCAATTTGTGCTCCTTCTGATTGTGGTAATGATGTTTCCATTAAGTACCCTTTCTGGAAACGTTCCGGCACCACCGTCGGAGAAGTTTGCGGTTATCCGGAGTTTGGTCTTGAATGTTCAAAAAAAGGCTACCCTATCCTCCAACTGAAAACTGACAAATACTATGTTACAGACATAAACTATGTGAATCATTCAATCACACTTGTTGACATTGATGTGATGAACGATACATGTCCAAGGGCAAAGAACAACGTTTCCATAGGGAACATACCTTTGTCTTTCAGTAATTTGGATATGAACATCACTTTCTACTTCAATTGCAGTTCTCAGCCTTCAGTGGTTGGTGCCGTGCCTATCAAGTGTTTGATAAATGGTGAGGGGAAGAAGTCTTATGTGTTTGAGGTTGGAACGGATATTGGTGGTAGGACTTGGACTAACTCTTGTGATGCTGAGGTTACGGTGGCAGTGAAGCATGGTGAGATCAAAAGTGATGATGACTTGATCAATGGGTTTGGTGCAGCTATGAGCAAAGGGTTTGTTCTTGATTGGAACAGAGCTGTGGATTGTGCTGAGTGCGAGCTTTCTGATGGGTATTGTGCATATAATGGAACTGCTAGGCAAACCTTGTGCATATGCAAAGATGGCAGAATTGTTGCCAAAAGTTGCAAAAAAGCTGCAGGTAATCGCTGGACCAGACTAAAGAAAGTCATTATTGGTGCTACAACAGCTGCAGTAATTGCAGGATTGATGAGTATTTGTTACTTTACATACAAGTTACCAAGATGGCGAGAAAAATATAGCTTTCCAACAAAAGGTAACCAGGATATTGAAACTTTCTTAAAAAATCATGGCGTGTTAACTATAAAACGATATAAATTCTCTGATGTGAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGACAAGGTGGTTTTGGTGTTGTATACAAGGGAAAGTTATCCGATGGTTCTAATGTGGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTAAAGAGTTTATCAATGAAGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCACCCTTTTTGGATTCTGCTTTGAAGGCCGCAAGAAAGTTCTTATTTATGAATTTATATCAAATGGTTCCCTTGACAAGTATATTTATAGAAAGGAAGGAGTTGAAACTACTACATTGTTGAGTTGGGATAAGCTGTATCAAATTGCCAAAGGGATAGCTAGGGGGTTAGAGTACTTGCATAGAGGATGCAACACTCAAATTTTACATTTTGACATAAAGCCACATAATATTCTTTTGGATGAAAATTTTTGTCCTAAGATATCAGATTTTGGACTAGCAAAACTTTGTCCTGGGAAGGAAAGTCTTATTTCCATGTCAGATGCTAGAGGAACAATAGGGTATATAGCTCCAGAAGTATGGAATAGACATTTCGGCAAAGCTTCTCATAAATCTGATGTTTATAGTTACGGAATGATGCTTCTTGATATAGTGGGAGGAAAGAAGAACATTAATGTAGAAGGGAGTCAAACAAGTGAGATATATTTCCCTGATTGGATATACAAAAAGCTTGAGCAAGGCACTCAATTAGGACCTGAAGATGGAGTGGTGGCAATAGAGGAAAATGAATTGGTTAAGAAAATGACGATTGTGGGTTTATGGTGTATTCAAACAATTCCAAATGATAGACCTACAATGAGTAAAGTTGTAGAAATGTTAGAAGGCAGCATAGATTCCATAAAAATGCCACCAAGACCTGCTCTGTCTTCTCCTGTAAGATCGATTGCAGAATCTTCTACTTTGTATTAG 1890 0.3804 MSKAFYLLCALFSTIFMTYYADSLPICAPSDCGNDVSIKYPFWKRSGTTVGEVCGYPEFGLECSKKGYPILQLKTDKYYVTDINYVNHSITLVDIDVMNDTCPRAKNNVSIGNIPLSFSNLDMNITFYFNCSSQPSVVGAVPIKCLINGEGKKSYVFEVGTDIGGRTWTNSCDAEVTVAVKHGEIKSDDDLINGFGAAMSKGFVLDWNRAVDCAECELSDGYCAYNGTARQTLCICKDGRIVAKSCKKAAGNRWTRLKKVIIGATTAAVIAGLMSICYFTYKLPRWREKYSFPTKGNQDIETFLKNHGVLTIKRYKFSDVKKMTNSFKVKLGQGGFGVVYKGKLSDGSNVAVKMLNPSKGNGKEFINEVASISRTSHVNVVTLFGFCFEGRKKVLIYEFISNGSLDKYIYRKEGVETTTLLSWDKLYQIAKGIARGLEYLHRGCNTQILHFDIKPHNILLDENFCPKISDFGLAKLCPGKESLISMSDARGTIGYIAPEVWNRHFGKASHKSDVYSYGMMLLDIVGGKKNINVEGSQTSEIYFPDWIYKKLEQGTQLGPEDGVVAIEENELVKKMTIVGLWCIQTIPNDRPTMSKVVEMLEGSIDSIKMPPRPALSSPVRSIAESSTLY 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03362 629 SUPERFAMILY Protein kinase-like (PK-like) 307 601 IPR011009 -
Arst5g03362 629 Pfam Protein kinase domain 328 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03362 629 SMART serkin_6 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03362 629 FunFam serine/threonine-protein kinase PBS1-like 295 399 - -
Arst5g03362 629 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Arst5g03362 629 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Arst5g03362 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Arst5g03362 629 Gene3D Transferase(Phosphotransferase) domain 1 400 614 - -
Arst5g03362 629 CDD STKc_IRAK 331 602 - -
Arst5g03362 629 ProSiteProfiles Protein kinase domain profile. 325 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03362 629 FunFam PR5-like receptor kinase 400 611 - -
Arst5g03362 629 Gene3D Phosphorylase Kinase; domain 1 299 399 - -
Arst5g03362 629 Pfam Wall-associated receptor kinase C-terminal 150 239 IPR032872 -
Arst5g03362 629 PANTHER RUST RESISTANCE KINASE LR10-RELATED 297 617 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03362 Arst-Chr5 92194120 92197257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03362 27 628 Receptor kinase-like Gene Family AT5G38260 40.747 1.87e-150 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst5g03362 Pkinase 5.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03362 - - gmx:100796618 746.503