Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03358 ATGGCGGCGAAAAGGTTTTTGGATGATTCTGATGATCGAGACCAAGATAAGCCAAACGACAAACGGATTAGATTTAATAGGCCTACTTTGGCTTCGGTAATAACCGAAGCTGTTAAGGTGAAAAATTTGCAAAACTTGTTTACAGTAGCCTTGGAACCTGTGCTCAAGAGAGTGGTGAGTGAAGAGGTTGATAGAGCGATGAGGCAATGGTGTTCTTGTTCTTCGTCAAGGTCCTTAACAAGGTCACCATCATTGAGAATCAAAGCATTTGACGATGATCAACCATCATCAACCTTGCAACTAGTCTTCAGCAAGAGGCTATCCCTTCCAATCTTCACCGGAAGCCGAATCCTCGACGTCGAAGGCAACCCTATAAGCATACTTCTCATGGACAAGAGCAGTGGCCAGATGGTTCCAACAAGCCTCCCACACCCAATCAAGCTCGAACTCCTCGTGCTCGACGGCGATTTCCCCCTTTCTGATAATGACAACTCGTCTTCATCTTCTTCATCTTCTCGTGGTTGGAGTAGTGAAGAATTCAATAGCCGCATAGTGAAGGAGAGAACTGGCAAGAGACCTTTGCTTGCCGGAGAGTTGAACCTCACCATGAGGGATGGCATTGCACCAACTGGGGACATTGAGTTCACCGATAATAGTAGCTGGATTCGCAGCCGGAAGTTCCGGGTTGCCGTTAGGGTGGCTCCGGGGACTAACCACCATGCTCTTGCAATTCGAGAAGGCATTACTGAAGCTTTTGTTGTCAAGGATCACCGTGGAGAATTGTACAAAAAACATCACCCACCAATGCTAAATGACGAAGTGTGGCGGCTAGAAAAGATTGGAAAGGATGGAGCTTTCCACAAAAAATTGAGCTCAGAAGGGATCAAAACAGTTCAAGACTTTCTCAAACTATCAGTTATTGATCCTCATAGGCTAAGAAAGATTTTGGGCATTGGGATGTCAGATAAAATGTGGGAAGTGACAATCAAGCATGCAAAGACTTGTGAAATGGGAAGCAAGATCTACATCTACCGTGGCCCTCATTTCACTCTTTTTCTTAATCCAATTTGCCAATTGATTAAAGCTGATGTCAATGGCCACACATTTCCTACCAAAGAACTTACCAATTTGAATAGGGCTTATATAGAGAAGTTGGTGAGAGAAGCATACGCTAAATGGCAAAACTTGGAGGAATTTGATGGGGTTTTGAATGATAACATTGCTTTGTTAACCCAAGGTGATGCAAATATGGAGCAATATCAAAATAATCATCCAGGTTCGGTGGTAACATATGATAGCAACGATTATTATGGTGACAAATCCACTGCCAGCTATGTACCAAGTAATAACAACAATGATAATAGTGCACTAATAATGGGGTCCATGGAGTGGTCCCTGAATAATAGTAACCCAGGATACACCACAGCATCATTCACCAATGGATTTCCCTATGGATTTTCATCAGGATCTCAATCGGACGGTGATATAACACCCACTTCAGGTTGTGTCATTGACGAGGCTCCAAGGAGACATATTTAG 1539 0.4353 MAAKRFLDDSDDRDQDKPNDKRIRFNRPTLASVITEAVKVKNLQNLFTVALEPVLKRVVSEEVDRAMRQWCSCSSSRSLTRSPSLRIKAFDDDQPSSTLQLVFSKRLSLPIFTGSRILDVEGNPISILLMDKSSGQMVPTSLPHPIKLELLVLDGDFPLSDNDNSSSSSSSSRGWSSEEFNSRIVKERTGKRPLLAGELNLTMRDGIAPTGDIEFTDNSSWIRSRKFRVAVRVAPGTNHHALAIREGITEAFVVKDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSSEGIKTVQDFLKLSVIDPHRLRKILGIGMSDKMWEVTIKHAKTCEMGSKIYIYRGPHFTLFLNPICQLIKADVNGHTFPTKELTNLNRAYIEKLVREAYAKWQNLEEFDGVLNDNIALLTQGDANMEQYQNNHPGSVVTYDSNDYYGDKSTASYVPSNNNNDNSALIMGSMEWSLNNSNPGYTTASFTNGFPYGFSSGSQSDGDITPTSGCVIDEAPRRHI 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03358 512 Pfam Calmodulin binding protein central domain 269 335 IPR046830 -
Arst5g03358 512 Pfam Calmodulin binding protein-like N-terminal domain 99 257 IPR046831 -
Arst5g03358 512 PANTHER OS02G0177800 PROTEIN 1 480 IPR012416 GO:0005516
Arst5g03358 512 MobiDBLite consensus disorder prediction 489 512 - -
Arst5g03358 512 MobiDBLite consensus disorder prediction 1 22 - -
Arst5g03358 512 Pfam Calmodulin binding protein C-terminal domain 340 399 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03358 Arst-Chr5 92156233 92160874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03358 3 401 Calmodulin-binding Proteins AT5G57580 47.761 1.33e-115 353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03358 5 92156233 92160874 Arst5g03358 5 92156233 92160874 ECH
Arst5g03358 5 92156233 92160874 Arst5g03358 5 92156233 92160874 PCT